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BaseInfo

ncRNA ID novel_gma_miR2923
Species Glycine max
Class miRNA
Genome position Chr15:45967833-45967932 [+]
Reference genome Glycine_max_v2.0
Source SRR1451664
Length 21
Mature sequence(if miRNA) 1 - UGUUUUUAACCUUUUGUUGGA - 21
Stem-loop(if miRNA) --      UA      -   -    ------A   --CAAGCAA    AGA   A
  UGUUUU  ACCUUU UGU UGGA       CUC         UCAU   CUC A
  ||||||  |||||| ||| ||||       |||         ||||   ||| U
  ACAGAA  UGGAAG ACA ACCU       GAG         AGUG   GGG U
AA      -C      C   U    AAAAAAC   AAAAUUUAA    GAA   U
Stem-loop sequence UGUUUUUAACCUUUUGUUGGAACUCCAAGCAAUCAUAGACUCAAUUUGGGAAGGUGAAAUUUAAAAGAGCAAAAAAUCCAUACACGAAGGUCAAGACAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003537503.3
ncRNA:21   AGGUUGUUUUCCAAUUUUUGU   1
  *||||||=|||*|||||||||
targets:1528   ACCAACAGAAGAUUAAAAACA   1548

2.5 PREDICTED: Glycine max midasin-like (LOC100800066), mRNA midasin-like(LOC100800066) coding protein psRNATarget
XM_003552749.3
ncRNA:21   AGGUUGUUUUCCAAUUUUUGU   1
  *=|||||=|||*|||||||||
targets:2043   AUCAACAGAAGAUUAAAAACA   2063

2.5 PREDICTED: Glycine max uncharacterized LOC100802021 (LOC100802021), mRNA uncharacterized LOC100802021(LOC100802021) coding protein psRNATarget
XM_006590952.2
ncRNA:21   AGGUUGUUUUCCAAUUUUUGU   1
  **|||*||||||||=||||||
targets:1559   AGCAAGAAAAGGUUGAAAACA   1579

2.5 PREDICTED: Glycine max uncharacterized LOC102669351 (LOC102669351), transcript variant X3, mRNA uncharacterized LOC102669351(LOC102669351) coding protein psRNATarget
XM_006590951.2
ncRNA:21   AGGUUGUUUUCCAAUUUUUGU   1
  **|||*||||||||=||||||
targets:1601   AGCAAGAAAAGGUUGAAAACA   1621

2.5 PREDICTED: Glycine max uncharacterized LOC102669351 (LOC102669351), transcript variant X2, mRNA uncharacterized LOC102669351(LOC102669351) coding protein psRNATarget
XM_006590950.2
ncRNA:21   AGGUUGUUUUCCAAUUUUUGU   1
  **|||*||||||||=||||||
targets:1601   AGCAAGAAAAGGUUGAAAACA   1621

2.5 PREDICTED: Glycine max uncharacterized LOC102669351 (LOC102669351), transcript variant X1, mRNA uncharacterized LOC102669351(LOC102669351) coding protein psRNATarget
XM_006592172.2
ncRNA:21   AGGUUGUUUUCCAAUUUUUGU   1
  **|||*||||||||=||||||
targets:1702   AGCAAGAAAAGGUUGAAAACA   1722

2.5 PREDICTED: Glycine max uncharacterized LOC102665298 (LOC102665298), transcript variant X2, mRNA uncharacterized LOC102665298(LOC102665298) coding protein psRNATarget
XM_006592171.2
ncRNA:21   AGGUUGUUUUCCAAUUUUUGU   1
  **|||*||||||||=||||||
targets:1702   AGCAAGAAAAGGUUGAAAACA   1722

2.5 PREDICTED: Glycine max uncharacterized LOC102665298 (LOC102665298), transcript variant X1, mRNA uncharacterized LOC102665298(LOC102665298) coding protein psRNATarget