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BaseInfo

ncRNA ID novel_gma_miR2919
Species Glycine max
Class miRNA
Genome position Chr14:43260285-43260431 [-]
Reference genome Glycine_max_v2.0
Source SRR1451664
Length 22
Mature sequence(if miRNA) 126 - GCACCAAUCUAUGCUUCUUCCU - 147
Stem-loop(if miRNA) --         UA   UUC      G       A             C     A     G             
  GCACCAAUC  UGC   UUCCUC UCUACCA UUCAAUAUCUUUC UUUCA CUUUU UUUUGUAAAUUACA
  |||||||||  |||   |||||| ||||||| ||||||||||||| ||||| ||||| |||||||||||||G
  CGUGGUUAG  ACG   GAGGAG AGAUGGU GAGUUAUAGAAAG AAAGU GAAAA AAAACAUUUGAUGU
GU         GC   UAC      G       C             C     G     G             
Stem-loop sequence GCACCAAUCUAUGCUUCUUCCUCGUCUACCAAUUCAAUAUCUUUCCUUUCAACUUUUGUUUUGUAAAUUACAGUGUAGUUUACAAAAGAAAAGGUGAAACGAAAGAUAUUGAGCUGGUAGAGGAGGAGCAUGCACGGAUUGGUGCUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006594811.2
ncRNA:22   UCCUUCUUCGUAUCUAACCACG   1
  ***||||||*|||||||||||*
targets:4977   UAUAAGAAGAAUAGAUUGGUGA   4998

2.5 PREDICTED: Glycine max histone-lysine N-methyltransferase ATXR3-like (LOC100776205), transcript variant X1, mRNA histone-lysine N-methyltransferase ATXR3-like(LOC100776205) coding protein psRNATarget
XM_006592762.2
ncRNA:22   UCCUUCUUCGUAUCUAACCACG   1
  ***||||||*|||||||||||*
targets:4969   UAUAAGAAGAAUAGAUUGGUGA   4990

2.5 PREDICTED: Glycine max histone-lysine N-methyltransferase ATXR3-like (LOC100804519), transcript variant X1, mRNA histone-lysine N-methyltransferase ATXR3-like(LOC100804519) coding protein psRNATarget
XM_006592763.2
ncRNA:22   UCCUUCUUCGUAUCUAACCACG   1
  ***||||||*|||||||||||*
targets:4969   UAUAAGAAGAAUAGAUUGGUGA   4990

2.5 PREDICTED: Glycine max histone-lysine N-methyltransferase ATXR3-like (LOC100804519), transcript variant X2, mRNA histone-lysine N-methyltransferase ATXR3-like(LOC100804519) coding protein psRNATarget
XM_006594812.2
ncRNA:22   UCCUUCUUCGUAUCUAACCACG   1
  ***||||||*|||||||||||*
targets:4978   UAUAAGAAGAAUAGAUUGGUGA   4999

2.5 PREDICTED: Glycine max histone-lysine N-methyltransferase ATXR3-like (LOC100776205), transcript variant X2, mRNA histone-lysine N-methyltransferase ATXR3-like(LOC100776205) coding protein psRNATarget