ncRNA ID | novel_gma_miR2919 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:43260285-43260431 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451664 |
Length | 22 |
Mature sequence(if miRNA) | 126 - GCACCAAUCUAUGCUUCUUCCU - 147 |
Stem-loop(if miRNA) |
--         UA   UUC      G       A             C     A     G                GCACCAAUC  UGC   UUCCUC UCUACCA UUCAAUAUCUUUC UUUCA CUUUU UUUUGUAAAUUACA   |||||||||  |||   |||||| ||||||| ||||||||||||| ||||| ||||| |||||||||||||G   CGUGGUUAG  ACG   GAGGAG AGAUGGU GAGUUAUAGAAAG AAAGU GAAAA AAAACAUUUGAUGU GU         GC   UAC      G       C             C     G     G              |
Stem-loop sequence | GCACCAAUCUAUGCUUCUUCCUCGUCUACCAAUUCAAUAUCUUUCCUUUCAACUUUUGUUUUGUAAAUUACAGUGUAGUUUACAAAAGAAAAGGUGAAACGAAAGAUAUUGAGCUGGUAGAGGAGGAGCAUGCACGGAUUGGUGCUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006594811.2 |
|
2.5 | PREDICTED: Glycine max histone-lysine N-methyltransferase ATXR3-like (LOC100776205), transcript variant X1, mRNA | histone-lysine N-methyltransferase ATXR3-like(LOC100776205) | coding protein | psRNATarget | |||||||||
XM_006592762.2 |
|
2.5 | PREDICTED: Glycine max histone-lysine N-methyltransferase ATXR3-like (LOC100804519), transcript variant X1, mRNA | histone-lysine N-methyltransferase ATXR3-like(LOC100804519) | coding protein | psRNATarget | |||||||||
XM_006592763.2 |
|
2.5 | PREDICTED: Glycine max histone-lysine N-methyltransferase ATXR3-like (LOC100804519), transcript variant X2, mRNA | histone-lysine N-methyltransferase ATXR3-like(LOC100804519) | coding protein | psRNATarget | |||||||||
XM_006594812.2 |
|
2.5 | PREDICTED: Glycine max histone-lysine N-methyltransferase ATXR3-like (LOC100776205), transcript variant X2, mRNA | histone-lysine N-methyltransferase ATXR3-like(LOC100776205) | coding protein | psRNATarget |