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BaseInfo

ncRNA ID novel_gma_miR2901
Species Glycine max
Class miRNA
Genome position Chr9:9802013-9802232 [+]
Reference genome Glycine_max_v2.0
Source SRR1451663
Length 21
Mature sequence(if miRNA) 1 - UUUGUGUAUCAGUUGGGAGAC - 21
Stem-loop(if miRNA) ---     GUA  ---  U  ------ GAGACUAUUUGAAAGCAAGAUAAUGUGUGAUUUAGUAGCCUAUUCUGCCAUAUAUAUACAUGGUUGUGACCGAGCCAUUGUUUAACUUU
   UUUGU   UC   AG UG      G                                                                                         G
   |||||   ||   || ||      |
   UACAC   AU   GU CA      C                                                                                         U
ACG     ---  AAU  -  AACUCG GCUGUUGUGUAACCGACUGAAGUCAUGUGUAACGGCUGUUGUGUAACCGACUGAACUGAUGUGUAAAUCCGCACAGAUAAAAAAACAUU
Stem-loop sequence UUUGUGUAUCAGUUGGGAGACUAUUUGAAAGCAAGAUAAUGUGUGAUUUAGUAGCCUAUUCUGCCAUAUAUAUACAUGGUUGUGACCGAGCCAUUGUUUAACUUUGUUUACAAAAAAAUAGACACGCCUAAAUGUGUAGUCAAGUCAGCCAAUGUGUUGUCGGCAAUGUGUACUGAAGUCAGCCAAUGUGUUGUCGCGCUCAAACUGUAAUACACAUGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003552535.2
ncRNA:21   CAGAGGGUUGACUAUGUGUUU   1
  **||=||||||||||||||||
targets:1429   CCCUUCCAACUGAUACACAAA   1449

1.0 PREDICTED: Glycine max transcription factor TCP13-like (LOC100816424), mRNA transcription factor TCP13-like(LOC100816424) coding protein psRNATarget