ncRNA ID | novel_gma_miR2901 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr9:9802013-9802232 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451663 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUUGUGUAUCAGUUGGGAGAC - 21 |
Stem-loop(if miRNA) |
---     GUA  ---  U  ------ GAGACUAUUUGAAAGCAAGAUAAUGUGUGAUUUAGUAGCCUAUUCUGCCAUAUAUAUACAUGGUUGUGACCGAGCCAUUGUUUAACUUU    UUUGU   UC   AG UG      G                                                                                         G    |||||   ||   || ||      |    UACAC   AU   GU CA      C                                                                                         U ACG     ---  AAU  -  AACUCG GCUGUUGUGUAACCGACUGAAGUCAUGUGUAACGGCUGUUGUGUAACCGACUGAACUGAUGUGUAAAUCCGCACAGAUAAAAAAACAUU |
Stem-loop sequence | UUUGUGUAUCAGUUGGGAGACUAUUUGAAAGCAAGAUAAUGUGUGAUUUAGUAGCCUAUUCUGCCAUAUAUAUACAUGGUUGUGACCGAGCCAUUGUUUAACUUUGUUUACAAAAAAAUAGACACGCCUAAAUGUGUAGUCAAGUCAGCCAAUGUGUUGUCGGCAAUGUGUACUGAAGUCAGCCAAUGUGUUGUCGCGCUCAAACUGUAAUACACAUGCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003552535.2 |
|
1.0 | PREDICTED: Glycine max transcription factor TCP13-like (LOC100816424), mRNA | transcription factor TCP13-like(LOC100816424) | coding protein | psRNATarget |