ncRNA ID | novel_gma_miR2900 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:26748876-26748954 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451663 |
Length | 21 |
Mature sequence(if miRNA) | 59 - CUUAAAUGGAUUGGAUCUUGA - 79 |
Stem-loop(if miRNA) |
--                        CAA    UUU  A   CUUAAAUGGAUUGGAUCUUGAAUC   AUUU   UA A   ||||||||||||||||||||||||   ||||   || A   GAAUUUACCUAACCUAGAAUUUAG   UAGG   AU A AU                        AUA    UAU  A |
Stem-loop sequence | CUUAAAUGGAUUGGAUCUUGAAUCCAAAUUUUUUUAAAAAAUAUAUGGAUAUAGAUUUAAGAUCCAAUCCAUUUAAGUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003549258.3 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100816713 (LOC100816713), transcript variant X3, mRNA | uncharacterized LOC100816713(LOC100816713) | coding protein | psRNATarget | |||||||||
XM_006601107.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100816713 (LOC100816713), transcript variant X2, mRNA | uncharacterized LOC100816713(LOC100816713) | coding protein | psRNATarget | |||||||||
XM_006601106.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100816713 (LOC100816713), transcript variant X1, mRNA | uncharacterized LOC100816713(LOC100816713) | coding protein | psRNATarget |