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BaseInfo

ncRNA ID novel_gma_miR2896
Species Glycine max
Class miRNA
Genome position Chr11:24751025-24751147 [+]
Reference genome Glycine_max_v2.0
Source SRR1451663
Length 22
Mature sequence(if miRNA) 102 - CAGAGAAUCGUCUUAGAAAGGU - 123
Stem-loop(if miRNA) --A                 CAUAU       U      UGU                    A
   UUUCUAAGAUGAUUUUU     AACCGUC UAGAGA   ACUUUUCUAAGACGAUUUUU A
   |||||||||||||||||     ||||||| ||||||   ||||||||||||||||||||
   AAAGAUUCUGCUAAGAG     UUGGUAG AUCUUU   UGGGAAGAUUUUGCUAAGAA C
UGG                 ACUGU       U      ---                    U
Stem-loop sequence AUUUCUAAGAUGAUUUUUCAUAUAACCGUCUUAGAGAUGUACUUUUCUAAGACGAUUUUUAACUAAGAAUCGUUUUAGAAGGGUUUUCUAUGAUGGUUUGUCAGAGAAUCGUCUUAGAAAGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771087.1
ncRNA:22   UGGAAAGAUUCUGCUAAGAGAC   1
  **|*||||||||||=|||||||
targets:2608   UACAUUCUAAGACGGUUCUCUG   2629

2.5 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget