ncRNA ID | novel_gma_miR2894 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:29758860-29758915 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294484;SRR1294485;SRR1294487;SRR1292924;SRR1295517;SRR1295518;SRR1295519;SRR1295520;SRR1295524;SRR1295525;SRR1295526;SRR1295527;SRR1295530;SRR1292928;SRR1295531;SRR1292929;SRR1294476 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGGAGAUGAGCUUAGUUAUGAGA - 24 |
Stem-loop(if miRNA) |
--A     -AU            GAGAG    AGGAG   GAGCUUAGUUAU     G    |||||   ||||||||||||     G    UCUUC   CUCGAAUCGAUG     G AAC     AAU            UGUGU |
Stem-loop sequence | AAGGAGAUGAGCUUAGUUAUGAGAGGGGUGUGUGUAGCUAAGCUCUAACUUCUCAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT090266.1 |
|
3.0 | Soybean clone JCVI-FLGm-4E15 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_003542700.3 |
|
3.0 | PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100306246), transcript variant X1, mRNA | probable ubiquitin-conjugating enzyme E2 24(LOC100306246) | coding protein | psRNATarget | |||||||||
XM_006594256.2 |
|
3.0 | PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100306246), transcript variant X2, mRNA | probable ubiquitin-conjugating enzyme E2 24(LOC100306246) | coding protein | psRNATarget |