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BaseInfo

ncRNA ID novel_gma_miR2888
Species Glycine max
Class miRNA
Genome position Chr6:13562941-13563058 [-]
Reference genome Glycine_max_v2.0
Source SRR1451663;SRR1451604;SRR1451606;SRR1451615;SRR1451618
Length 22
Mature sequence(if miRNA) 1 - UGGUGUAUGAAUUCAAAUCUUU - 22
Stem-loop(if miRNA) --           UG                     CC   A    UG        GGG
  AGAUUUGAAUU  UACACCAUACCAUCAGUGGCA  AAC AGAU  UAACAGUU   U
  |||||||||||  |||||||||||||||||||||  ||| ||||  ||||||||
  UCUAAACUUAA  AUGUGGUGUGGUAGUCACCGU  UUG UCUA  AUUGUCGG   U
UU           GU                     CC   C    GU        GGG
Stem-loop sequence AGAUUUGAAUUUGUACACCAUACCAUCAGUGGCACCAACAAGAUUGUAACAGUUGGGUUGGGGGCUGUUAUGAUCUCGUUCCUGCCACUGAUGGUGUGGUGUAUGAAUUCAAAUCUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT094785.1
ncRNA:22   UUUCUAAACUUAAGUAUGUGGU   1
  **|*||||*|||||||||||||
targets:195   CCACAUUUCAAUUCAUACACCA   216

2.0 Soybean clone JCVI-FLGm-6M19 unknown mRNA NA coding protein psRNATarget