ncRNA ID | novel_gma_miR2888 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:13562941-13563058 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451663;SRR1451604;SRR1451606;SRR1451615;SRR1451618 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UGGUGUAUGAAUUCAAAUCUUU - 22 |
Stem-loop(if miRNA) |
--           UG                     CC   A    UG        GGG   AGAUUUGAAUU  UACACCAUACCAUCAGUGGCA  AAC AGAU  UAACAGUU   U   |||||||||||  |||||||||||||||||||||  ||| ||||  ||||||||   UCUAAACUUAA  AUGUGGUGUGGUAGUCACCGU  UUG UCUA  AUUGUCGG   U UU           GU                     CC   C    GU        GGG |
Stem-loop sequence | AGAUUUGAAUUUGUACACCAUACCAUCAGUGGCACCAACAAGAUUGUAACAGUUGGGUUGGGGGCUGUUAUGAUCUCGUUCCUGCCACUGAUGGUGUGGUGUAUGAAUUCAAAUCUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT094785.1 |
|
2.0 | Soybean clone JCVI-FLGm-6M19 unknown mRNA | NA | coding protein | psRNATarget |