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BaseInfo

ncRNA ID novel_gma_miR2887
Species Glycine max
Class miRNA
Genome position Chr6:14410019-14410086 [-]
Reference genome Glycine_max_v2.0
Source SRR1451663
Length 21
Mature sequence(if miRNA) 1 - UAAUUUGAUCAAUCCAUACUC - 21
Stem-loop(if miRNA) --                               A
  GUAUGGAUUGAUCAAAUUAUGUUAUAUAUAU U
  |||||||||||||||||||||||||||||||
  CAUACCUAACUAGUUUAAUACAAUAUAUAUA A
CU                               U
Stem-loop sequence GUAUGGAUUGAUCAAAUUAUGUUAUAUAUAUAUAUAUAUAUAUAACAUAAUUUGAUCAAUCCAUACUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014762300.1
ncRNA:21   CUCAUACCUAACUAGUUUAAU   1
  *|||=**||||||||||||||
targets:669   CAGUGGAGAUUGAUCAAAUUA   689

3.0 PREDICTED: Glycine max probable rhamnogalacturonate lyase B (LOC100801633), transcript variant X2, mRNA probable rhamnogalacturonate lyase B(LOC100801633) coding protein psRNATarget
XM_006587520.2
ncRNA:21   CUCAUACCUAACUAGUUUAAU   1
  *|||=**||||||||||||||
targets:679   CAGUGGAGAUUGAUCAAAUUA   699

3.0 PREDICTED: Glycine max probable rhamnogalacturonate lyase B (LOC100801633), transcript variant X1, mRNA probable rhamnogalacturonate lyase B(LOC100801633) coding protein psRNATarget