ncRNA ID | novel_gma_miR2887 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:14410019-14410086 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451663 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UAAUUUGAUCAAUCCAUACUC - 21 |
Stem-loop(if miRNA) |
--                               A   GUAUGGAUUGAUCAAAUUAUGUUAUAUAUAU U   |||||||||||||||||||||||||||||||   CAUACCUAACUAGUUUAAUACAAUAUAUAUA A CU                               U |
Stem-loop sequence | GUAUGGAUUGAUCAAAUUAUGUUAUAUAUAUAUAUAUAUAUAUAACAUAAUUUGAUCAAUCCAUACUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014762300.1 |
|
3.0 | PREDICTED: Glycine max probable rhamnogalacturonate lyase B (LOC100801633), transcript variant X2, mRNA | probable rhamnogalacturonate lyase B(LOC100801633) | coding protein | psRNATarget | |||||||||
XM_006587520.2 |
|
3.0 | PREDICTED: Glycine max probable rhamnogalacturonate lyase B (LOC100801633), transcript variant X1, mRNA | probable rhamnogalacturonate lyase B(LOC100801633) | coding protein | psRNATarget |