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BaseInfo

ncRNA ID novel_gma_miR2877
Species Glycine max
Class miRNA
Genome position Chr4:43711095-43711149 [-]
Reference genome Glycine_max_v2.0
Source SRR1451663
Length 24
Mature sequence(if miRNA) 1 - UACAACAUCGGUUUUCAAAUAAUC - 24
Stem-loop(if miRNA) --      UA           C  CUAA
  UUAUUU  AAAACUGAUGU GU    G
  ||||||  ||||||||||| ||
  AAUAAA  UUUUGGCUACA CA    C
CU      -C           A  UUCA
Stem-loop sequence UUAUUUUAAAAACUGAUGUCGUCUAAGCACUUACAACAUCGGUUUUCAAAUAAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003537739.3
ncRNA:24   CUAAUAAACUUUUGGCUACAACAU   1
  *||*|*||||||=|||||||||||
targets:1548   UAUGAAUUGAAAGCCGAUGUUGUA   1571

2.5 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g09820 (LOC100791270), mRNA pentatricopeptide repeat-containing protein At1g09820(LOC100791270) coding protein psRNATarget
XM_014764817.1
ncRNA:23   UAAUAAACUUUUGGCUACAACAU   1
  =||-|||||||||||||||*||=
targets:1   GUU-UUUGAAAACCGAUGUCGUG   22

2.5 PREDICTED: Glycine max uncharacterized LOC102659453 (LOC102659453), mRNA uncharacterized LOC102659453(LOC102659453) coding protein psRNATarget