Search result

BaseInfo

ncRNA ID novel_gma_miR2874
Species Glycine max
Class miRNA
Genome position Chr4:10890342-10890419 [+]
Reference genome Glycine_max_v2.0
Source SRR1451663
Length 22
Mature sequence(if miRNA) 1 - UUAUGGCUUAUGGACAUGGUCU - 22
Stem-loop(if miRNA) --       U  UG          -UU     CC    C
  UUAUGGC UA  GACAUGGUCU   UUUAC  CUAA A
  ||||||| ||  ||||||||||   |||||  |||| A
  GAUACCG AU  UUGUACCAGA   AAAUG  GAUU U
CC       U  UU          UAU     AA    C
Stem-loop sequence UUAUGGCUUAUGGACAUGGUCUUUUUUACCCCUAACAAUCUUAGAAGUAAAUAUAGACCAUGUUUUUAUGCCAUAGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003525798.3
ncRNA:22   UCUGGUACAGGUAUUCGGUAUU   1
  |**||||*||||||||||||=|
targets:194   AUUCCAUUUCCAUAAGCCAUGA   215

2.5 PREDICTED: Glycine max uncharacterized LOC100802794 (LOC100802794), mRNA uncharacterized LOC100802794(LOC100802794) coding protein psRNATarget