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BaseInfo

ncRNA ID novel_gma_miR2866
Species Glycine max
Class miRNA
Genome position Chr7:39038673-39038773 [+]
Reference genome Glycine_max_v2.0
Source SRR1294484
Length 24
Mature sequence(if miRNA) 1 - AAGUUGAUCCGUAAGACUUCUAUG - 24
Stem-loop(if miRNA) --  G            A   -C          G          UUGUU  GU
  AA UUGAUCCGUAAG CUU  UAUGGAUCAA UUGAUCCGUG     CC  A
  || |||||||||||| |||  |||||||||| ||||||||||     ||
  UU AACUAGGCAUUC GAA  AUGCUUAGUU AACUAGGCAU     GG  A
AG  G            -   AA          G          ---UC  AA
Stem-loop sequence AAGUUGAUCCGUAAGACUUCUAUGGAUCAAGUUGAUCCGUGUUGUUCCGUAAAAGGCUUACGGAUCAAGUUGAUUCGUAAAAAGCUUACGGAUCAAGUUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006600975.2
ncRNA:24   GUAUCUUCAGAAUGCCUAGUUGAA   1
  |=||*|||*|||||||||||||||
targets:1241   CGUAAAAGCCUUACGGAUCAACUU   1264

1.0 PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA basic leucine zipper 9-like(LOC100776831) coding protein psRNATarget