ncRNA ID | novel_gma_miR2863 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:31280574-31280729 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451663 |
Length | 24 |
Mature sequence(if miRNA) | 133 - AUUAAAGCCAGAAUCGUUGUGAUC - 156 |
Stem-loop(if miRNA) |
--       A      C        C   A                    CAUA              AC    C UU   UCGCAAC GUUUUG CUUUAAUU CUA UAGCACCAAAAGAUCAAGUU    GAGGAUGCGAAAGC  UAGG A  G   ||||||| |||||| |||||||| ||| ||||||||||||||||||||    ||||||||||||||  |||| |   AGUGUUG UAAGAC GAAAUUAA GAU AUCGUGGUUUUCUAGUUCAA    CUCCUACGCUUUCG  AUCC U  G CU       C      C        A   C                    ACAC              AU    U UA |
Stem-loop sequence | UCGCAACAGUUUUGCCUUUAAUUCCUAAUAGCACCAAAAGAUCAAGUUCAUAGAGGAUGCGAAAGCACUAGGCAUUGGAUUUCCUAUAGCUUUCGCAUCCUCCACAAACUUGAUCUUUUGGUGCUACUAGAAAUUAAAGCCAGAAUCGUUGUGAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003547602.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized protein At4g15970 (LOC100777865), mRNA | uncharacterized protein At4g15970(LOC100777865) | coding protein | psRNATarget | |||||||||
AK285985.1 |
|
3.0 | Glycine max cDNA, clone: GMFL01-19-O01 | NA | coding protein | psRNATarget | |||||||||
XM_006600952.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized protein At4g15970-like (LOC102666668), mRNA | uncharacterized protein At4g15970-like(LOC102666668) | coding protein | psRNATarget |