ncRNA ID | novel_gma_miR2857 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr19:29093042-29093126 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451663 |
Length | 20 |
Mature sequence(if miRNA) | 1 - AUAACCAAUGUAGAAUGAUC - 20 |
Stem-loop(if miRNA) |
--CA                  G     -C          A U     AUUCUACAUUGGUUAUUA CAAAA  CGAUGUAGAA G G     |||||||||||||||||| |||||  |||||||||| | A     UAAGAUGUAACCAAUAAU GUUUU  GCUACAUCUU C A CUAG                  -     UA          A U |
Stem-loop sequence | CAAUUCUACAUUGGUUAUUAGCAAAACCGAUGUAGAAAGUGAAUCAUUCUACAUCGAUUUUUGUAAUAACCAAUGUAGAAUGAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014767461.1 |
|
1.5 | PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA | putative dual specificity protein phosphatase DSP8(LOC100787468) | coding protein | psRNATarget |