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BaseInfo

ncRNA ID novel_gma_miR2857
Species Glycine max
Class miRNA
Genome position Chr19:29093042-29093126 [-]
Reference genome Glycine_max_v2.0
Source SRR1451663
Length 20
Mature sequence(if miRNA) 1 - AUAACCAAUGUAGAAUGAUC - 20
Stem-loop(if miRNA) --CA                  G     -C          A U
    AUUCUACAUUGGUUAUUA CAAAA  CGAUGUAGAA G G
    |||||||||||||||||| |||||  |||||||||| | A
    UAAGAUGUAACCAAUAAU GUUUU  GCUACAUCUU C A
CUAG                  -     UA          A U
Stem-loop sequence CAAUUCUACAUUGGUUAUUAGCAAAACCGAUGUAGAAAGUGAAUCAUUCUACAUCGAUUUUUGUAAUAACCAAUGUAGAAUGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767461.1
ncRNA:20   CUAGUAAGAUGUAACCAAUA   1
  *||||||||||||*||||||
targets:451   AAUCAUUCUACAUCGGUUAU   470

1.5 PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA putative dual specificity protein phosphatase DSP8(LOC100787468) coding protein psRNATarget