ncRNA ID | novel_gma_miR2848 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:25436280-25436404 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451663 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CAGAGAAUCGUCUUAGAAUGU - 21 |
Stem-loop(if miRNA) |
GU  - A            AG A AAACAUUCUUAGAAAGUGGACCUUUUAAGACAGUUUUGCAC   UU C AAGACGGUUUCU  G A                                         A   || | ||||||||||||  | |   UG A AGAUUCUGCUAA  G A                                         G --  U -            -- - GACCUCUUGGUAGAAUCUUUCAGAUGUAAGAUUCUGCCAAA |
Stem-loop sequence | GUUUCAAAGACGGUUUCUAGGAAAAACAUUCUUAGAAAGUGGACCUUUUAAGACAGUUUUGCACAGAAACCGUCUUAGAAUGUAGACUUUCUAAGAUGGUUCUCCAGAGAAUCGUCUUAGAAUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014771087.1 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA | uncharacterized LOC102664939(LOC102664939) | coding protein | psRNATarget |