ncRNA ID | novel_gma_miR2836 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:9397315-9397409 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294484;SRR1294485;SRR1292929 |
Length | 24 |
Mature sequence(if miRNA) | 72 - GUAGAAAAACUCUCAAAAGCACUU - 95 |
Stem-loop(if miRNA) |
--GA G         C  C      -    UAU  A  CUUCUCC   UC     G UUUUGAGAG UU UCUACU GAAA   AG GC       UUC  U     | ||||||||| || |||||| ||||   || ||       |||     C AAAACUCUC AA AGAUGA CUUU   UC CG       AAG  A UUCA G         A  A      U    ---  -  AAAUAUA   UA |
Stem-loop sequence | GAGGUUUUGAGAGCUUCUCUACUGAAAUAUAGAGCCUUCUCCUUCUCUAAUGAAAUAUAAAGCCUUUUCUAGUAGAAAAACUCUCAAAAGCACUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006605184.2 |
|
2.5 | PREDICTED: Glycine max RING-H2 finger protein ATL5-like (LOC100800433), mRNA | RING-H2 finger protein ATL5-like(LOC100800433) | coding protein | psRNATarget | |||||||||
XM_014772955.1 |
|
2.5 | PREDICTED: Glycine max heavy metal-associated isoprenylated plant protein 26-like (LOC100779672), transcript variant X2, mRNA | heavy metal-associated isoprenylated plant protein 26-like(LOC100779672) | coding protein | psRNATarget |