ncRNA ID | novel_gma_miR2832 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:34656840-34656970 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451663 |
Length | 22 |
Mature sequence(if miRNA) | 110 - CAUUCUAAGACGGUCGUUAGCU - 131 |
Stem-loop(if miRNA) |
--               A        C                GAG                   AU   CUAAUGACCGUCUUA AAUGUCCA UUUCUAAGACGGUUGU   CUAAUGACUGUCUUAGAAA  A   ||||||||||||||| |||||||| ||||||||||||||||   |||||||||||||||||||   GAUUGCUGGCAGAAU UUACAGGU AAAGAUUCUGCCAGCA   GAUUAUUGGCAGAAUCUUU  G UC               C        A                ---                   CA |
Stem-loop sequence | CUAAUGACCGUCUUAAAAUGUCCACUUUCUAAGACGGUUGUGAGCUAAUGACUGUCUUAGAAAAUAGACUUUCUAAGACGGUUAUUAGACGACCGUCUUAGAAAAUGGACAUUCUAAGACGGUCGUUAGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014762037.1 |
|
2.0 | PREDICTED: Glycine max putative DUF21 domain-containing protein At1g03270 (LOC102659380), mRNA | putative DUF21 domain-containing protein At1g03270(LOC102659380) | coding protein | psRNATarget | |||||||||
XM_014767461.1 |
|
2.0 | PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA | putative dual specificity protein phosphatase DSP8(LOC100787468) | coding protein | psRNATarget | |||||||||
XM_014773514.1 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC106798042 (LOC106798042), transcript variant X1, mRNA | uncharacterized LOC106798042(LOC106798042) | coding protein | psRNATarget |