ncRNA ID | novel_gma_miR2824 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:26695687-26695845 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451663 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAACAUCGGGUUUUGUAAAUAACC - 24 |
Stem-loop(if miRNA) |
--         -GU        U                             AU            ---UCA      A  U   UAACAUCGG   UUUGUAAA AACCGAUGUUAAUAUGCGUAAAUAACAUC  UUUUUGGAAGAA      AUGUUA GU G   |||||||||   |||||||| |||||||||||||||||||||||||||||  ||||||||||||      |||||| || U   GUUGUAGCU   AAAUGUUU UUGGCUACAAUUAUAUGUGUUUGUUGUAG  AAAAACUUUUUU      UACAAU CG A UU         AAU        -                             CU            UUUUAC      -  U |
Stem-loop sequence | UAACAUCGGGUUUUGUAAAUAACCGAUGUUAAUAUGCGUAAAUAACAUCAUUUUUUGGAAGAAUCAAUGUUAAGUUGUAUGCUAACAUCAUUUUUUUUUUCAAAAAUCGAUGUUGUUUGUGUAUAUUAACAUCGGUUUUUGUAAAUAAUCGAUGUUGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003544817.3 |
|
3.0 | PREDICTED: Glycine max probable serine/threonine-protein kinase At4g35230 (LOC100781583), transcript variant X2, mRNA | probable serine/threonine-protein kinase At4g35230(LOC100781583) | coding protein | psRNATarget | |||||||||
XM_003544816.3 |
|
3.0 | PREDICTED: Glycine max probable serine/threonine-protein kinase At4g35230 (LOC100781583), transcript variant X1, mRNA | probable serine/threonine-protein kinase At4g35230(LOC100781583) | coding protein | psRNATarget |