ncRNA ID |
novel_gma_miR2822 |
Species |
Glycine max |
Class |
miRNA |
Genome position |
Chr5:16458588-16458719 [-] |
Reference genome |
Glycine_max_v2.0 |
Source |
SRR1294484
|
Length |
24 |
Mature sequence(if miRNA) |
109 - CAAUUUCGUGCGUCUCUAUAUGUG - 132 |
Stem-loop(if miRNA) |
--      C -      U U    G    UC  C  -   C     -UCC     AAAAG       CAU
  CAAUUU G UGCGUC C AUAU UGAG  GC CG AAU GGACA    GAGUU     UGAUGUG   U
  |||||| | |||||| | |||| ||||  || || ||| |||||    |||||     |||||||
  GUUAAG C GCGUAG G UAUA GCUC  CG GC UUA CUUGU    UUCGA     ACUGUAU   U
AG      U U      C -    -    UA  A  A   A     UGCC     ---GA       AAA
|
Stem-loop sequence |
CAAUUUCGUGCGUCUCUAUAUGUGAGUCGCCCGAAUCGGACAUCCGAGUUAAAAGUGAUGUGCAUUUAAAUAUGUCAAGAGCUUCCGUUGUUCAAUUACGAGCAUCUCGAUAUGCGAUGCGUCUGAAUUGGA
|