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BaseInfo

ncRNA ID	novel_gma_miR2816
Species	Glycine max
Class	miRNA
Genome position	Chr10:10941674-10941869 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451663
Length	23
Mature sequence(if miRNA)	1 - CAAAGAACUACAACAAAAAAAGU - 23
Stem-loop(if miRNA)	--      AC         AA            G  G  A               G  G A                UA             A    U   CAAAGA  UACAACAAA  AAGUGUAUGCAU AU AA GUUGACAUCGGUUUU UA U AAACCGAUGUUAAUGU  UAUAUUGACAUCG UUCU U   ||||||  |||||||||  |||||||||||| || || ||||||||||||||| || | ||||||||||||||||  ||||||||||||| |||| A   GUUUCU  AUGUUGUUU  UUCAUAUACGUA UA UU UAACUGUAGCCAAAA AU A UUUGGCUACAAUUAUA  AUGUAAUUGUAGC AAGA G AU      GC         -A            G  G  G               G  G C                UA             C    A
Stem-loop sequence	CAAAGAACUACAACAAAAAAAGUGUAUGCAUGAUGAAAGUUGACAUCGGUUUUGUAGUAAAACCGAUGUUAAUGUUAUAUAUUGACAUCGAUUCUUUAGAAGAACCGAUGUUAAUGUAAUAUAUUAACAUCGGUUUCAGUAGAAAACCGAUGUCAAUGUUGAUGAUGCAUAUACUUAUUUGUUGUACGUCUUUGUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006580490.2	ncRNA:23   UGAAAAAAACAACAUCAAGAAAC   1   |=|**||||||||||*||||||| targets:1793   AUUCAUUUUGUUGUAUUUCUUUG   1815 Target Full Sequence	2.5	PREDICTED: Glycine max zinc finger CCCH domain-containing protein 1-like (LOC100787434), transcript variant X1, mRNA	zinc finger CCCH domain-containing protein 1-like(LOC100787434)	coding protein	psRNATarget
XM_006580491.2	ncRNA:23   UGAAAAAAACAACAUCAAGAAAC   1   |=|**||||||||||*||||||| targets:1671   AUUCAUUUUGUUGUAUUUCUUUG   1693 Target Full Sequence	2.5	PREDICTED: Glycine max zinc finger CCCH domain-containing protein 1-like (LOC100787434), transcript variant X2, mRNA	zinc finger CCCH domain-containing protein 1-like(LOC100787434)	coding protein	psRNATarget
XM_006580492.2	ncRNA:23   UGAAAAAAACAACAUCAAGAAAC   1   |=|**||||||||||*||||||| targets:1466   AUUCAUUUUGUUGUAUUUCUUUG   1488 Target Full Sequence	2.5	PREDICTED: Glycine max zinc finger CCCH domain-containing protein 1-like (LOC100787434), transcript variant X3, mRNA	zinc finger CCCH domain-containing protein 1-like(LOC100787434)	coding protein	psRNATarget
XM_003525332.3	ncRNA:23   UGAAAAAAACAACAUCAAGAAAC   1   |=|**||||||||||*||||||| targets:1391   AUUCAUUUUGUUGUAUUUCUUUG   1413 Target Full Sequence	2.5	PREDICTED: Glycine max zinc finger CCCH domain-containing protein 1-like (LOC100787434), transcript variant X4, mRNA	zinc finger CCCH domain-containing protein 1-like(LOC100787434)	coding protein	psRNATarget
XM_003521742.3	ncRNA:23   UGAAAAAAACAACAUCAAGAAAC   1   |=|**||||||||||*||||||| targets:1348   AUUCGUUUUGUUGUAUUUCUUUG   1370 Target Full Sequence	2.5	PREDICTED: Glycine max zinc finger CCCH domain-containing protein 1 (LOC100817146), mRNA	zinc finger CCCH domain-containing protein 1(LOC100817146)	coding protein	psRNATarget