ncRNA ID | novel_gma_miR2813 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:30554197-30554276 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451663;SRR835765 |
Length | 21 |
Mature sequence(if miRNA) | 60 - CUUAAAUGGAUUGGAUCUUGA - 80 |
Stem-loop(if miRNA) |
--                  U     CAA   --AU    G   CUUAAAUGGAUUGGAUCU GAAUC   AUU    UUUU A   |||||||||||||||||| |||||   |||    ||||   GAAUUUACCUAACCUAGA UUUAG   UAG    AAAA A UU                  C     AUA   GUAU    A |
Stem-loop sequence | CUUAAAUGGAUUGGAUCUUGAAUCCAAAUUAUUUUUGAAAAAAAUAUGGAUAUAGAUUUCAGAUCCAAUCCAUUUAAGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003549258.3 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100816713 (LOC100816713), transcript variant X3, mRNA | uncharacterized LOC100816713(LOC100816713) | coding protein | psRNATarget | |||||||||
XM_006601107.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100816713 (LOC100816713), transcript variant X2, mRNA | uncharacterized LOC100816713(LOC100816713) | coding protein | psRNATarget | |||||||||
XM_006601106.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100816713 (LOC100816713), transcript variant X1, mRNA | uncharacterized LOC100816713(LOC100816713) | coding protein | psRNATarget |