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BaseInfo

ncRNA ID novel_gma_miR2813
Species Glycine max
Class miRNA
Genome position Chr11:30554197-30554276 [-]
Reference genome Glycine_max_v2.0
Source SRR1451663;SRR835765
Length 21
Mature sequence(if miRNA) 60 - CUUAAAUGGAUUGGAUCUUGA - 80
Stem-loop(if miRNA) --                  U     CAA   --AU    G
  CUUAAAUGGAUUGGAUCU GAAUC   AUU    UUUU A
  |||||||||||||||||| |||||   |||    ||||
  GAAUUUACCUAACCUAGA UUUAG   UAG    AAAA A
UU                  C     AUA   GUAU    A
Stem-loop sequence CUUAAAUGGAUUGGAUCUUGAAUCCAAAUUAUUUUUGAAAAAAAUAUGGAUAUAGAUUUCAGAUCCAAUCCAUUUAAGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003549258.3
ncRNA:21   AGUUCUAGGUUAGGUAAAUUC   1
  **||||||||*|||||||||*
targets:2689   CAAAGAUCCAUUCCAUUUAAA   2709

2.5 PREDICTED: Glycine max uncharacterized LOC100816713 (LOC100816713), transcript variant X3, mRNA uncharacterized LOC100816713(LOC100816713) coding protein psRNATarget
XM_006601107.2
ncRNA:21   AGUUCUAGGUUAGGUAAAUUC   1
  **||||||||*|||||||||*
targets:2685   CAAAGAUCCAUUCCAUUUAAA   2705

2.5 PREDICTED: Glycine max uncharacterized LOC100816713 (LOC100816713), transcript variant X2, mRNA uncharacterized LOC100816713(LOC100816713) coding protein psRNATarget
XM_006601106.2
ncRNA:21   AGUUCUAGGUUAGGUAAAUUC   1
  **||||||||*|||||||||*
targets:2690   CAAAGAUCCAUUCCAUUUAAA   2710

2.5 PREDICTED: Glycine max uncharacterized LOC100816713 (LOC100816713), transcript variant X1, mRNA uncharacterized LOC100816713(LOC100816713) coding protein psRNATarget