Search result

BaseInfo

ncRNA ID novel_gma_miR2808
Species Glycine max
Class miRNA
Genome position Chr11:32330866-32330998 [+]
Reference genome Glycine_max_v2.0
Source SRR1451662
Length 24
Mature sequence(if miRNA) 1 - UAAAAACUGAUGUCGUUAAGCACU - 24
Stem-loop(if miRNA) --UA           C                   A             C           CACAC
    AAAACUGAUGU GUUAAGCACUUACAACAUC GUUUUCAAAUAAC GAUGUUAAAAU     U
    ||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||     A
    UUUUGGCUACA CAAUUCGUGAAUGUUGUAG UAAAAGUUUAUUG CUACAAUUUUG     A
AAAC           U                   C             U           AUUUA
Stem-loop sequence UAAAAACUGAUGUCGUUAAGCACUUACAACAUCAGUUUUCAAAUAACCGAUGUUAAAAUCACACUAAAUUUAGUUUUAACAUCUGUUAUUUGAAAAUCGAUGUUGUAAGUGCUUAACUACAUCGGUUUUCAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006603060.2
ncRNA:24   UCACGAAUUGCUGUAGUCAAAAAU   1
  |***||||=|||||||||*|||||
targets:2307   ACCUCUUAGCGACAUCAGAUUUUA   2330

2.5 PREDICTED: Glycine max cation/H(+) antiporter 14-like (LOC100804488), mRNA cation/H(+) antiporter 14-like(LOC100804488) coding protein psRNATarget