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BaseInfo

ncRNA ID	novel_gma_miR2800
Species	Glycine max
Class	miRNA
Genome position	Chr8:40985099-40985207 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451662;SRR1451610
Length	21
Mature sequence(if miRNA)	89 - CUUUUGGUAUUGUUCUCCAAU - 109
Stem-loop(if miRNA)	--                     A   C    C GG       -    GUC    U   UGGAGAACAGUAUCAAAAGCA CUA GGAA U  AUCUAAG UUUU   CCUA U   ||||||||||||||||||||| ||| |||| |  ||||||| ||||   ||||   ACCUCUUGUUAUGGUUUUCGU GAU CCUU A  UAGAUUC GAAA   GGAU U UA                     G   U    C AG       U    --A    U
Stem-loop sequence	UGGAGAACAGUAUCAAAAGCAACUACGGAACUGGAUCUAAGUUUUGUCCCUAUUUUUAGGAAAAGUCUUAGAUGAACUUCCUUAGGUGCUUUUGGUAUUGUUCUCCAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006594101.2	ncRNA:21   UAACCUCUUGUUAUGGUUUUC   1   |||||||||||||||=||||| targets:260   AUUGGAGAACAAUACUAAAAG   280 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100810255 (LOC100810255), transcript variant X7, mRNA	uncharacterized LOC100810255(LOC100810255)	coding protein	psRNATarget
XM_006594099.2	ncRNA:21   UAACCUCUUGUUAUGGUUUUC   1   |||||||||||||||=||||| targets:342   AUUGGAGAACAAUACUAAAAG   362 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100810255 (LOC100810255), transcript variant X9, mRNA	uncharacterized LOC100810255(LOC100810255)	coding protein	psRNATarget
XM_006594098.2	ncRNA:21   UAACCUCUUGUUAUGGUUUUC   1   |||||||||||||||=||||| targets:420   AUUGGAGAACAAUACUAAAAG   440 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100810255 (LOC100810255), transcript variant X6, mRNA	uncharacterized LOC100810255(LOC100810255)	coding protein	psRNATarget
XM_014765532.1	ncRNA:21   UAACCUCUUGUUAUGGUUUUC   1   |||||||||||||||=||||| targets:442   AUUGGAGAACAAUACUAAAAG   462 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100810255 (LOC100810255), transcript variant X5, mRNA	uncharacterized LOC100810255(LOC100810255)	coding protein	psRNATarget
XM_006587042.2	ncRNA:21   UAACCUCUUGUUAUGGUUUUC   1   |||||||||||||||=||||* targets:3018   AUUGGAGAACAAUACUAAAAU   3038 Target Full Sequence	2.5	PREDICTED: Glycine max subtilisin-like protease SBT2.5 (LOC100820468), mRNA	subtilisin-like protease SBT2.5(LOC100820468)	coding protein	psRNATarget
AK287327.1	ncRNA:21   UAACCUCUUGUUAUGGUUUUC   1   ||||||||||||*|||||||* targets:826   AUUGGAGAACAACACCAAAAA   846 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-49-O18	NA	coding protein	psRNATarget
AK285528.1	ncRNA:21   UAACCUCUUGUUAUGGUUUUC   1   |||*||*|||||||||||||* targets:2023   AUUAGAAAACAAUACCAAAAA   2043 Target Full Sequence	3.0	Glycine max cDNA, clone: GMFL01-10-P20	NA	coding protein	psRNATarget
XM_003524477.3	ncRNA:21   UAACCUCUUGUUAUGGUUUUC   1   |||*||*|||||||||||||* targets:2033   AUUAGAAAACAAUACCAAAAA   2053 Target Full Sequence	3.0	PREDICTED: Glycine max 3-ketoacyl-CoA synthase 11-like (LOC100817884), mRNA	3-ketoacyl-CoA synthase 11-like(LOC100817884)	coding protein	psRNATarget