ncRNA ID | novel_gma_miR2799 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:48880246-48880326 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294484 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAUGAGAGUAGGAAGAUGAUGAGU - 24 |
Stem-loop(if miRNA) |
--G       U      A        ---U     AAAAUUG    AUGAGAG AGGAAG UGAUGAGU    UUCAA       A    ||||||| |||||| ||||||||    |||||       C    UAUUCUU UUCUUC AUUAUUCA    AAGUU       A UUA       -      G        UGUU     CAAUUCC |
Stem-loop sequence | GAUGAGAGUAGGAAGAUGAUGAGUUUUCAAAAAAUUGACACCUUAACUUGAAUUGUACUUAUUAGCUUCUUUUCUUAUAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003536833.3 |
|
2.5 | PREDICTED: Glycine max probable pectinesterase/pectinesterase inhibitor 41 (LOC100790729), mRNA | probable pectinesterase/pectinesterase inhibitor 41(LOC100790729) | coding protein | psRNATarget |