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BaseInfo

ncRNA ID novel_gma_miR2798
Species Glycine max
Class miRNA
Genome position Chr7:31524735-31524816 [+]
Reference genome Glycine_max_v2.0
Source SRR1451662
Length 21
Mature sequence(if miRNA) 1 - UUUGUUUUAGUCCCUAACUUU - 21
Stem-loop(if miRNA) --UUU    U                 -        UCU  
     GUUU AGUCCCUAACUUUUAAA CCAUAAGU   GGU
     |||| ||||||||||||||||| ||||||||   ||C
     CAAA UCAGGGAUUGAAGAUUU GGUGUUCA   CCU
UAAAC    U                 U        CUU  
Stem-loop sequence UUUGUUUUAGUCCCUAACUUUUAAACCAUAAGUUCUGGUCUCCUUCACUUGUGGUUUUAGAAGUUAGGGACUUAAACCAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014777288.1
ncRNA:21   UUUCAAUCCCUGAUUUUGUUU   1
  ||||*|||||||||||||*||
targets:2721   AAAGAUAGGGACUAAAACCAA   2741

2.5 PREDICTED: Glycine max uncharacterized LOC100819869 (LOC100819869), transcript variant X3, mRNA uncharacterized LOC100819869(LOC100819869) coding protein psRNATarget
XM_003526040.3
ncRNA:21   UUUCAAUCCCUGAUUUUGUUU   1
  ||||*|||||||||||||*||
targets:2721   AAAGAUAGGGACUAAAACCAA   2741

2.5 PREDICTED: Glycine max uncharacterized LOC100819869 (LOC100819869), transcript variant X2, mRNA uncharacterized LOC100819869(LOC100819869) coding protein psRNATarget
XM_014777287.1
ncRNA:21   UUUCAAUCCCUGAUUUUGUUU   1
  ||||*|||||||||||||*||
targets:2721   AAAGAUAGGGACUAAAACCAA   2741

2.5 PREDICTED: Glycine max uncharacterized LOC100819869 (LOC100819869), transcript variant X1, mRNA uncharacterized LOC100819869(LOC100819869) coding protein psRNATarget
XM_014768540.1
ncRNA:21   UUUCA-AUCCCUGAUUUUGUUU   1
  |||*|-||||||||||||||||
targets:412   AAACUAUAGGGACUAAAACAAA   433

3.0 PREDICTED: Glycine max LRR receptor-like serine/threonine-protein kinase GSO2 (LOC106794149), mRNA LRR receptor-like serine/threonine-protein kinase GSO2(LOC106794149) coding protein psRNATarget