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BaseInfo

ncRNA ID novel_gma_miR2797
Species Glycine max
Class miRNA
Genome position Chr6:26216805-26216873 [-]
Reference genome Glycine_max_v2.0
Source SRR1451662
Length 20
Mature sequence(if miRNA) 1 - CUUACGGAUCAACUUGAUUU - 20
Stem-loop(if miRNA) --AUA          A                 A
     GAGUUGAUCC UAAGGUUCUUUCGGAUC A
     |||||||||| ||||||||||||||||| C
     UUCAACUAGG AUUCCAAGAAAGCCUAG A
UUUAG          C                 U
Stem-loop sequence AUAGAGUUGAUCCAUAAGGUUCUUUCGGAUCAACAUGAUCCGAAAGAACCUUACGGAUCAACUUGAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003524153.3
ncRNA:20   UUUAGUUCAACUAGGCAUUC   1
  ==|||||||||||||||||*
targets:237   GGAUCAAGUUGAUCCGUAAA   256

2.0 PREDICTED: Glycine max uncharacterized LOC100805437 (LOC100805437), mRNA uncharacterized LOC100805437(LOC100805437) coding protein psRNATarget
XM_006600975.2
ncRNA:20   UUUAGUUCAACUAGGCAUUC   1
  ==|||||*||||||||||||
targets:1255   GGAUCAACUUGAUCCGUAAG   1274

2.5 PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA basic leucine zipper 9-like(LOC100776831) coding protein psRNATarget
XM_003547498.3
ncRNA:20   UUUAGUUCAACUAGGCAUUC   1
  ==|||||*||||||||||||
targets:460   GGAUCAACUUGAUCCGUAAG   479

2.5 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_014768353.1
ncRNA:20   UUUAGUUCAACUAGGCAUUC   1
  ==|||||*||||||||||||
targets:1055   GGAUCAACUUGAUCCGUAAG   1074

2.5 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget