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BaseInfo

ncRNA ID novel_gma_miR2792
Species Glycine max
Class miRNA
Genome position Chr4:31406707-31406917 [-]
Reference genome Glycine_max_v2.0
Source SRR1451662
Length 24
Mature sequence(if miRNA) 1 - UUGCUGUAGUUCUUUGUAUAUAAC - 24
Stem-loop(if miRNA) --                  A                            C       CUAUACAUUU                   -UUA                U
  UAUAUACAAAGAACUACA CAAAAUAAGUGUAUGCAUGAUGAACGUU ACAUCGG          AAAAACCGAUGUUAAUGUG    GUUAACAUCGGUUUUC A
  |||||||||||||||||| |||||||||||||||||||||||||||| |||||||          |||||||||||||||||||    ||||||||||||||||
  AUAUAUGUUUCUUGAUGU GUUUUAUUCACAUACGUACUACUUGUAA UGUAGCC          UUUUUGGCUACAAUUACGU    UAAUUGUAGCCAAAAG U
CA                  C                            C       --AAAAGAAU                   UAUA                A
Stem-loop sequence UAUAUACAAAGAACUACAACAAAAUAAGUGUAUGCAUGAUGAACGUUCACAUCGGCUAUACAUUUAAAAACCGAUGUUAAUGUGUUAGUUAACAUCGGUUUUCUAUAGAAAACCGAUGUUAAUAUAUUGCAUUAACAUCGGUUUUUUAAGAAAACCGAUGUCAAUGUUCAUCAUGCAUACACUUAUUUUGCUGUAGUUCUUUGUAUAUAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001254404.2
ncRNA:24   CAAU------AUAUGUUUCUUGAUGUCGUU   1
  ||||------||||*|||||||||*|||||
targets:1096   GUUAGUUUCUUAUAAAAAGAACUAGAGCAA   1125

2.5 Glycine max NAC domain-containing protein 42-like (LOC100790471), mRNA NAC domain-containing protein 42-like(LOC100790471) coding protein psRNATarget
BT096898.1
ncRNA:24   CAAU------AUAUGUUUCUUGAUGUCGUU   1
  ||||------||||*|||||||||*|||||
targets:1097   GUUAGUUUCUUAUAAAAAGAACUAGAGCAA   1126

2.5 Soybean clone JCVI-FLGm-15F10 unknown mRNA NA coding protein psRNATarget