ncRNA ID | gba-miR167c |
Species | Gossypium barbadense |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - UGAAGCUGCCAGCAUGAUCU - NA |
Stem-loop(if miRNA) |
UU    A            C  C          AA      UA    UC  ---    U   -  UCCUUCUUUAUGUAACAUUCUUUAACCAGUCUUGAUAUAGAUGUAGUGUGUAGCGGAGGUGAGAGAUACCCGCAGUUAAGUAGAUUGUAUAGGACCAGUUUGGAUCA   UGAG GGUUGAAGCUGC AG AUGAUCUGGU  UGAAUC  GACA  AC   UCUU UCU UU                                                                                                           A   |||| |||||||||||| || ||||||||||  ||||||  ||||  ||   |||| ||| ||                                                                                                           A   ACUC CUAACUUCGACG UC UACUGGACUA  ACUUGG  UAUA  GA   UUCG UUC GG                                                                                                           A UC    A            U  -          CG      --    --  UAC    A   A  UUCGUCCCAAGAAAUGAAUUCUGUAGAUUUAAUUAAGGUUUAAUUACUGUUAUGGGGAUAGGAGUUUUACGAAAGUCGUGUAUUUAUUAAGGAGAAGGUGAGCUCUU |
Stem-loop sequence | UUUGAGAGGUUGAAGCUGCCAGCAUGAUCUGGUAAUGAAUCUAGACAUCACUCUUUUCUUUUCCUUCUUUAUGUAACAUUCUUUAACCAGUCUUGAUAUAGAUGUAGUGUGUAGCGGAGGUGAGAGAUACCCGCAGUUAAGUAGAUUGUAUAGGACCAGUUUGGAUCAAAAUUCUCGAGUGGAAGAGGAAUUAUUUAUGUGCUGAAAGCAUUUUGAGGAUAGGGGUAUUGUCAUUAAUUUGGAAUUAAUUUAGAUGUCUUAAGUAAAGAACCCUGCUUGGACUUAGCUUCAUAGAUAUGGUUCAGCAUCAGGUCAUCUUGCAGCUUCAAUCACUCACU |