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BaseInfo

ncRNA ID novel_gma_miR2784
Species Glycine max
Class miRNA
Genome position Chr3:24598860-24598931 [-]
Reference genome Glycine_max_v2.0
Source SRR1451662
Length 22
Mature sequence(if miRNA) 51 - UCAAAGAACCGUCUUAGAAUGU - 72
Stem-loop(if miRNA) --    AG                UUACAUUCU       U
  UCAA  AACCGUCUUAGAAUGU         AAUUUUU A
  ||||  ||||||||||||||||         |||||||
  AGUU  UUGGCAGAAUCUUAUA         UUAAAAA A
AA    -A                ---------       A
Stem-loop sequence UCAAAGAACCGUCUUAGAAUGUUUACAUUCUAAUUUUUUAAAAAAAAUUAUAUUCUAAGACGGUUAUUGAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771087.1
ncRNA:22   UGUAAGAUUCUGCCAAGAAACU   1
  ||||||||||||||||||||||
targets:2513   ACAUUCUAAGACGGUUCUUUGA   2534

0.0 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget
XM_014771087.1
ncRNA:22   UGUAAGAUUCUGCCAAGAAACU   1
  ||||||||||||||||||*|||
targets:2609   ACAUUCUAAGACGGUUCUCUGA   2630

1.5 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget
XM_014773514.1
ncRNA:22   UGUAAGAUUCUGCCAAGAAACU   1
  ||||||||||||||||*||||=
targets:268   ACAUUCUAAGACGGUUAUUUGG   289

2.5 PREDICTED: Glycine max uncharacterized LOC106798042 (LOC106798042), transcript variant X1, mRNA uncharacterized LOC106798042(LOC106798042) coding protein psRNATarget