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BaseInfo

ncRNA ID novel_gma_miR2782
Species Glycine max
Class miRNA
Genome position Chr20:16897507-16897591 [+]
Reference genome Glycine_max_v2.0
Source SRR1451662;SRR1451605
Length 24
Mature sequence(if miRNA) 1 - AGAGAAAUACAAUACUAUUAAGAC - 24
Stem-loop(if miRNA) --                                   G AUA
  AGAGAAAUACAAUACUAUUAAGACAACUAAAAUAU U   A
  ||||||||||||||||||||||||||||||||||| |   U
  UCUCUUUAUGUUAUGAUAAUUCUGUUGAUUUUAUA A   C
UG                                   G AAA
Stem-loop sequence AGAGAAAUACAAUACUAUUAAGACAACUAAAAUAUGUAUAAUCAAAAGAUAUUUUAGUUGUCUUAAUAGUAUUGUAUUUCUCUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006601929.2
ncRNA:24   CAGAAUUAUCAUAACAUAAAGAGA   1
  **|||||*||||||||||||||=|
targets:2446   UGCUUAAGAGUAUUGUAUUUCUUU   2469

2.5 PREDICTED: Glycine max uncharacterized LOC100802549 (LOC100802549), transcript variant X2, mRNA uncharacterized LOC100802549(LOC100802549) coding protein psRNATarget
XM_006601928.2
ncRNA:24   CAGAAUUAUCAUAACAUAAAGAGA   1
  **|||||*||||||||||||||=|
targets:2566   UGCUUAAGAGUAUUGUAUUUCUUU   2589

2.5 PREDICTED: Glycine max uncharacterized LOC100802549 (LOC100802549), transcript variant X1, mRNA uncharacterized LOC100802549(LOC100802549) coding protein psRNATarget