ncRNA ID | novel_gma_miR2766 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:35364982-35365157 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451662 |
Length | 19 |
Mature sequence(if miRNA) | 158 - CAUCGGUUUUUUAAAUAAU - 176 |
Stem-loop(if miRNA) |
--                       AG                 UUU    U                                 AUU   UAUUUAAAAAACCGAUGUUAACU  AACUAACAACAUUGGUU   UAAA AAUCGAUGUUAACUGGAACUAACAACAUCGGUU   U   |||||||||||||||||||||||  |||||||||||||||||   |||| |||||||||||||||||||||||||||||||||   AUAAAUUUUUUGGCUACGAUUGA  UUGAUUGUUGUAGCUAA   AUUU UUGGUUACAAUUGACCUUGAUUGUUGUAGCCAA   A UA                       CU                 UAC    U                                 AAA |
Stem-loop sequence | UAUUUAAAAAACCGAUGUUAACUAGAACUAACAACAUUGGUUUUUUAAAUAAUCGAUGUUAACUGGAACUAACAACAUCGGUUAUUUAAAAAACCGAUGUUGUUAGUUCCAGUUAACAUUGGUUUUUUACAUAAUCGAUGUUGUUAGUUUCAGUUAGCAUCGGUUUUUUAAAUAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT095557.1 |
|
2.5 | Soybean clone JCVI-FLGm-19F5 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_014768576.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100776811 (LOC100776811), transcript variant X1, mRNA | uncharacterized LOC100776811(LOC100776811) | coding protein | psRNATarget | |||||||||
XM_003541375.3 |
|
2.5 | PREDICTED: Glycine max protein EXORDIUM-like 2 (LOC100810770), mRNA | protein EXORDIUM-like 2(LOC100810770) | coding protein | psRNATarget |