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BaseInfo

ncRNA ID novel_gma_miR2766
Species Glycine max
Class miRNA
Genome position Chr17:35364982-35365157 [+]
Reference genome Glycine_max_v2.0
Source SRR1451662
Length 19
Mature sequence(if miRNA) 158 - CAUCGGUUUUUUAAAUAAU - 176
Stem-loop(if miRNA) --                       AG                 UUU    U                                 AUU
  UAUUUAAAAAACCGAUGUUAACU  AACUAACAACAUUGGUU   UAAA AAUCGAUGUUAACUGGAACUAACAACAUCGGUU   U
  |||||||||||||||||||||||  |||||||||||||||||   |||| |||||||||||||||||||||||||||||||||
  AUAAAUUUUUUGGCUACGAUUGA  UUGAUUGUUGUAGCUAA   AUUU UUGGUUACAAUUGACCUUGAUUGUUGUAGCCAA   A
UA                       CU                 UAC    U                                 AAA
Stem-loop sequence UAUUUAAAAAACCGAUGUUAACUAGAACUAACAACAUUGGUUUUUUAAAUAAUCGAUGUUAACUGGAACUAACAACAUCGGUUAUUUAAAAAACCGAUGUUGUUAGUUCCAGUUAACAUUGGUUUUUUACAUAAUCGAUGUUGUUAGUUUCAGUUAGCAUCGGUUUUUUAAAUAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT095557.1
ncRNA:19   UAAUAAAUUUUUUGGCUAC   1
  *|||||||||||||*||||
targets:553   UUUAUUUAAAAAACGGAUG   571

2.5 Soybean clone JCVI-FLGm-19F5 unknown mRNA NA coding protein psRNATarget
XM_014768576.1
ncRNA:19   UAAUAAAUUUUUUGGCUAC   1
  |||||||||||||||*||*
targets:698   AUUAUUUAAAAAACCUAUA   716

2.5 PREDICTED: Glycine max uncharacterized LOC100776811 (LOC100776811), transcript variant X1, mRNA uncharacterized LOC100776811(LOC100776811) coding protein psRNATarget
XM_003541375.3
ncRNA:19   UAAUAAAUUUUUUGGCUAC   1
  *|||||||||||||*||||
targets:1262   UUUAUUUAAAAAACGGAUG   1280

2.5 PREDICTED: Glycine max protein EXORDIUM-like 2 (LOC100810770), mRNA protein EXORDIUM-like 2(LOC100810770) coding protein psRNATarget