ncRNA ID | gba-miR167a |
Species | Gossypium barbadense |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - UGAAGCUGCCAGCAUGAUCU - NA |
Stem-loop(if miRNA) |
UU    A            C  C          AA     UUA    UC  ---    -      UCCUUCUUUAUGUGAUAUUCUUUAACCAGUCUUGAUAUAGAUGUAGUGUGUAGCGGAGGUGAGAGAUACCCGCAGUUAAGUAGAUUGUAUAGGACCAGUUUGGAUCAAAA   UGAG GGUUGAAGCUGC AG AUGAUCUGGU  UGAAU   GACA  AC   UCUU UUCUUU                                                                                                              U   |||| |||||||||||| || ||||||||||  |||||   ||||  ||   |||| ||||||                                                                                                              U   ACUC CUAACUUCGACG UC UACUGGACUA  ACUUG   UAUA  GA   UUCG UUCAGG                                                                                                              C UC    A            U  -          CG     --G    --  UAC    A      UUCGUCCUAAGAAAUGAAUUCUGUAGAUUUAAUUAAGGGAAUUGUUUAAUUACUGUUAUGGGGAUAGGAGUUUUACGAAAGUCGUGUAUUUAUUGAGGAGAAGGUGGUCU |
Stem-loop sequence | UUUGAGAGGUUGAAGCUGCCAGCAUGAUCUGGUAAUGAAUUUAGACAUCACUCUUUUCUUUUCCUUCUUUAUGUGAUAUUCUUUAACCAGUCUUGAUAUAGAUGUAGUGUGUAGCGGAGGUGAGAGAUACCCGCAGUUAAGUAGAUUGUAUAGGACCAGUUUGGAUCAAAAUUCUCUGGUGGAAGAGGAGUUAUUUAUGUGCUGAAAGCAUUUUGAGGAUAGGGGUAUUGUCAUUAAUUUGUUAAGGGAAUUAAUUUAGAUGUCUUAAGUAAAGAAUCCUGCUUGGACUUAGCUUCAUAGAUAUGGUUCAGCAUCAGGUCAUCUUGCAGCUUCAAUCACUCACU |