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BaseInfo

ncRNA ID novel_gma_miR2751
Species Glycine max
Class miRNA
Genome position Chr11:34193324-34193456 [-]
Reference genome Glycine_max_v2.0
Source SRR1451662
Length 21
Mature sequence(if miRNA) 1 - AAAAUCUCUCAUAAAAUGUCA - 21
Stem-loop(if miRNA) --           C  U       UGUCAUAAAUUAAU    A       CC    --G   UU  AUU
  AUAUUUUGUGA AG UUUUAAC              UUUU UUUUUUA  GCUU   AAU  GU   U
  ||||||||||| || |||||||              |||| |||||||  ||||   |||  ||
  UGUAAAAUACU UC AAAAUUG              AAAA AAAAAAU  CGAA   UUA  CA   U
AC           C  U       -UGAAACACUGACC    -       UA    ACA   -U  AAA
Stem-loop sequence AUAUUUUGUGACAGUUUUUAACUGUCAUAAAUUAAUUUUUAUUUUUUACCGCUUGAAUUUGUAUUUUAAAACUAUUACAAAGCAUUAAAAAAAAAACCAGUCACAAAGUGUUAAAAUCUCUCAUAAAAUGUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767062.1
ncRNA:21   ACUGUAAAAUACUCUCUAAAA   1
  *|||||*|||||||||||||*
targets:1627   AGACAUCUUAUGAGAGAUUUG   1647

2.0 PREDICTED: Glycine max nuclear transcription factor Y subunit A-9 (LOC100815617), transcript variant X2, mRNA nuclear transcription factor Y subunit A-9(LOC100815617) coding protein psRNATarget
XM_003544477.3
ncRNA:21   ACUGUAAAAUACUCUCUAAAA   1
  *|||||*|||||||||||||*
targets:1790   AGACAUCUUAUGAGAGAUUUG   1810

2.0 PREDICTED: Glycine max nuclear transcription factor Y subunit A-9 (LOC100815617), transcript variant X1, mRNA nuclear transcription factor Y subunit A-9(LOC100815617) coding protein psRNATarget
XM_014777093.1
ncRNA:21   ACUGUAAAAUACUCUCUAAAA   1
  *||*|||||||||*|||||||
targets:1977   AGAGAUUUUAUGAUAGAUUUU   1997

2.5 PREDICTED: Glycine max uncharacterized LOC100784953 (LOC100784953), mRNA uncharacterized LOC100784953(LOC100784953) coding protein psRNATarget