ncRNA ID | novel_gma_miR2751 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:34193324-34193456 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451662 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AAAAUCUCUCAUAAAAUGUCA - 21 |
Stem-loop(if miRNA) |
--           C  U       UGUCAUAAAUUAAU    A       CC    --G   UU  AUU   AUAUUUUGUGA AG UUUUAAC              UUUU UUUUUUA  GCUU   AAU  GU   U   ||||||||||| || |||||||              |||| |||||||  ||||   |||  ||   UGUAAAAUACU UC AAAAUUG              AAAA AAAAAAU  CGAA   UUA  CA   U AC           C  U       -UGAAACACUGACC    -       UA    ACA   -U  AAA |
Stem-loop sequence | AUAUUUUGUGACAGUUUUUAACUGUCAUAAAUUAAUUUUUAUUUUUUACCGCUUGAAUUUGUAUUUUAAAACUAUUACAAAGCAUUAAAAAAAAAACCAGUCACAAAGUGUUAAAAUCUCUCAUAAAAUGUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014767062.1 |
|
2.0 | PREDICTED: Glycine max nuclear transcription factor Y subunit A-9 (LOC100815617), transcript variant X2, mRNA | nuclear transcription factor Y subunit A-9(LOC100815617) | coding protein | psRNATarget | |||||||||
XM_003544477.3 |
|
2.0 | PREDICTED: Glycine max nuclear transcription factor Y subunit A-9 (LOC100815617), transcript variant X1, mRNA | nuclear transcription factor Y subunit A-9(LOC100815617) | coding protein | psRNATarget | |||||||||
XM_014777093.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100784953 (LOC100784953), mRNA | uncharacterized LOC100784953(LOC100784953) | coding protein | psRNATarget |