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BaseInfo

ncRNA ID novel_gma_miR2745
Species Glycine max
Class miRNA
Genome position Chr7:14078240-14078374 [+]
Reference genome Glycine_max_v2.0
Source SRR1451661;SRR1451609;SRR1451611;SRR1451612;SRR1451618
Length 21
Mature sequence(if miRNA) 115 - UUUUCUAAUUUAUUAGGGACU - 135
Stem-loop(if miRNA) --           G           A     A      A         --      G    AGA    U
  UCCUUGAUAAA UAGAGAAUUUU UGUUU CUUCCU AUAAUUUUU  UCAUUU UUAU   CUUU G
  ||||||||||| ||||||||||| ||||| |||||| |||||||||  |||||| ||||   ||||
  AGGGAUUAUUU AUCUUUUAAAA ACAAA GAGGGA UAUUAAAAA  AGUAAA AAUA   GAAA A
UC           A           -     C      C         AC      A    AUA    A
Stem-loop sequence UCCUUGAUAAAGUAGAGAAUUUUAUGUUUACUUCCUAAUAAUUUUUUCAUUUGUUAUAGACUUUUGAAAAAGAUAAUAAAAAAUGACAAAAAAUUAUCAGGGAGCAAACAAAAAUUUUCUAAUUUAUUAGGGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006587189.2
ncRNA:21   UCAGGGAUUAUUUAAUCUUUU   1
  |||=*|||||||||||||||=
targets:879   AGUUACUAAUAAAUUAGAAAG   899

3.0 PREDICTED: Glycine max gamma-tubulin complex component 4 homolog (LOC102666534), mRNA gamma-tubulin complex component 4 homolog(LOC102666534) coding protein psRNATarget