ncRNA ID | novel_gma_miR2745 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:14078240-14078374 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451661;SRR1451609;SRR1451611;SRR1451612;SRR1451618 |
Length | 21 |
Mature sequence(if miRNA) | 115 - UUUUCUAAUUUAUUAGGGACU - 135 |
Stem-loop(if miRNA) |
--           G           A     A      A         --      G    AGA    U   UCCUUGAUAAA UAGAGAAUUUU UGUUU CUUCCU AUAAUUUUU  UCAUUU UUAU   CUUU G   ||||||||||| ||||||||||| ||||| |||||| |||||||||  |||||| ||||   ||||   AGGGAUUAUUU AUCUUUUAAAA ACAAA GAGGGA UAUUAAAAA  AGUAAA AAUA   GAAA A UC           A           -     C      C         AC      A    AUA    A |
Stem-loop sequence | UCCUUGAUAAAGUAGAGAAUUUUAUGUUUACUUCCUAAUAAUUUUUUCAUUUGUUAUAGACUUUUGAAAAAGAUAAUAAAAAAUGACAAAAAAUUAUCAGGGAGCAAACAAAAAUUUUCUAAUUUAUUAGGGACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006587189.2 |
|
3.0 | PREDICTED: Glycine max gamma-tubulin complex component 4 homolog (LOC102666534), mRNA | gamma-tubulin complex component 4 homolog(LOC102666534) | coding protein | psRNATarget |