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BaseInfo

ncRNA ID novel_gma_miR2740
Species Glycine max
Class miRNA
Genome position Chr7:7658101-7658191 [+]
Reference genome Glycine_max_v2.0
Source SRR1451661
Length 24
Mature sequence(if miRNA) 1 - AUAUGUUUGGAUAGAGAAUUUUAA - 24
Stem-loop(if miRNA) --AU     UG     A        -----A   AGAAAAGUAAUUUA
    AUGUU  GAUAG GAAUUUUA      CUG              U
    |||||  ||||| ||||||||      |||
    UAUAG  UUGUU CUUAAGAU      UCU              C
UUUU     GU     A        CUAAUG   UUAAGUUUAGGAGA
Stem-loop sequence AUAUGUUUGGAUAGAGAAUUUUAACUGAGAAAAGUAAUUUAUCAGAGGAUUUGAAUUUCUGUAAUCUAGAAUUCAUUGUUUGGAUAUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003554316.3
ncRNA:24   AAUUUUAAGAGAUAGGUUUGUAUA   1
  ***=||||*|||=|||||||||||
targets:788   CGUGAAUUAUCUGUCCAAACAUAU   811

2.5 PREDICTED: Glycine max DEAD-box ATP-dependent RNA helicase 57-like (LOC100800969), mRNA DEAD-box ATP-dependent RNA helicase 57-like(LOC100800969) coding protein psRNATarget