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BaseInfo

ncRNA ID novel_gma_miR2734
Species Glycine max
Class miRNA
Genome position Chr4:50128551-50128627 [+]
Reference genome Glycine_max_v2.0
Source SRR1451661
Length 21
Mature sequence(if miRNA) 1 - CAUUUUCUAGCACACUCUUUU - 21
Stem-loop(if miRNA) --      C               GAU     C  UG  A
  CAUUUU UAGCACACUCUUUUU   GCAGU UC  AU U
  |||||| |||||||||||||||   ||||| ||  ||
  GUGAAA AUUGUGUGGGAAAAG   UGUUA AG  UG U
AU      C               --U     -  GU  G
Stem-loop sequence CAUUUUCUAGCACACUCUUUUUGAUGCAGUCUCUGAUAUUGGUUGGAAUUGUUGAAAAGGGUGUGUUACAAAGUGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014774933.1
ncRNA:21   UUUUCUCACACGAUCUUUUAC   1
  |||||||||||||||||||||
targets:2199   AAAAGAGUGUGCUAGAAAAUG   2219

0.0 PREDICTED: Glycine max oligopeptide transporter 9-like (LOC100806644), transcript variant X2, mRNA oligopeptide transporter 9-like(LOC100806644) coding protein psRNATarget
XM_003522491.3
ncRNA:21   UUUUCUCACACGAUCUUUUAC   1
  |||||||||||||||||||||
targets:2423   AAAAGAGUGUGCUAGAAAAUG   2443

0.0 PREDICTED: Glycine max oligopeptide transporter 9-like (LOC100806644), transcript variant X1, mRNA oligopeptide transporter 9-like(LOC100806644) coding protein psRNATarget
XM_006592293.2
ncRNA:21   UUUUCUCACACGAUCUUUUAC   1
  |*|||=|||*|||||||||||
targets:2385   ACAAGGGUGAGCUAGAAAAUG   2405

2.5 PREDICTED: Glycine max receptor protein kinase TMK1-like (LOC100815045), mRNA receptor protein kinase TMK1-like(LOC100815045) coding protein psRNATarget