ncRNA ID | novel_gma_miR2734 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:50128551-50128627 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451661 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CAUUUUCUAGCACACUCUUUU - 21 |
Stem-loop(if miRNA) |
--      C               GAU     C  UG  A   CAUUUU UAGCACACUCUUUUU   GCAGU UC  AU U   |||||| |||||||||||||||   ||||| ||  ||   GUGAAA AUUGUGUGGGAAAAG   UGUUA AG  UG U AU      C               --U     -  GU  G |
Stem-loop sequence | CAUUUUCUAGCACACUCUUUUUGAUGCAGUCUCUGAUAUUGGUUGGAAUUGUUGAAAAGGGUGUGUUACAAAGUGUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014774933.1 |
|
0.0 | PREDICTED: Glycine max oligopeptide transporter 9-like (LOC100806644), transcript variant X2, mRNA | oligopeptide transporter 9-like(LOC100806644) | coding protein | psRNATarget | |||||||||
XM_003522491.3 |
|
0.0 | PREDICTED: Glycine max oligopeptide transporter 9-like (LOC100806644), transcript variant X1, mRNA | oligopeptide transporter 9-like(LOC100806644) | coding protein | psRNATarget | |||||||||
XM_006592293.2 |
|
2.5 | PREDICTED: Glycine max receptor protein kinase TMK1-like (LOC100815045), mRNA | receptor protein kinase TMK1-like(LOC100815045) | coding protein | psRNATarget |