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BaseInfo

ncRNA ID	novel_gma_miR2733
Species	Glycine max
Class	miRNA
Genome position	Chr20:7715026-7715133 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1294484;SRR1294486
Length	24
Mature sequence(if miRNA)	85 - UGUGAGGAGUGAGGACUGAGAGGU - 108
Stem-loop(if miRNA)	-    A -      C       - -   A     -------------AG  U AGA         CCUC C GUUCUC ACUUCUC C UUG CUGAG               GC G   GCUGCAGU  |||| | |||||| ||||||| | ||| |||||               || |   |||||||A  GGAG G CAGGAG UGAGGAG G AAC GAUUU               CG C   CGAUGUCG U    A U      -       U U   -     GGAAUUAGAAUAAAA  - -GG
Stem-loop sequence	CCUCACGUUCUCCACUUCUCCUUGACUGAGAGGCUGAGAGCUGCAGUAGCUGUAGCGGCGCAAAAUAAGAUUAAGGUUUAGCAAUGUGAGGAGUGAGGACUGAGAGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014778252.1	ncRNA:24   UGGAGAGUCAGGAGUGAGGAGUGU   1   |||||||||||||||||||||||| targets:249   ACCUCUCAGUCCUCACUCCUCACA   272 Target Full Sequence	0.0	PREDICTED: Glycine max zinc finger BED domain-containing protein RICESLEEPER 2-like (LOC100796027), transcript variant X1, mRNA	zinc finger BED domain-containing protein RICESLEEPER 2-like(LOC100796027)	coding protein	psRNATarget
XM_014778253.1	ncRNA:24   UGGAGAGUCAGGAGUGAGGAGUGU   1   |||||||||||||||||||||||| targets:249   ACCUCUCAGUCCUCACUCCUCACA   272 Target Full Sequence	0.0	PREDICTED: Glycine max zinc finger BED domain-containing protein RICESLEEPER 2-like (LOC100796027), transcript variant X2, mRNA	zinc finger BED domain-containing protein RICESLEEPER 2-like(LOC100796027)	coding protein	psRNATarget
XM_014768704.1	ncRNA:24   UGGAGAGUCAGGAGUGAGGAGUGU   1   |||||||||||||||||||||||| targets:60   ACCUCUCAGUCCUCACUCCUCACA   83 Target Full Sequence	0.0	PREDICTED: Glycine max uncharacterized LOC102659660 (LOC102659660), mRNA	uncharacterized LOC102659660(LOC102659660)	coding protein	psRNATarget
XM_014764752.1	ncRNA:24   UG--GAGAGUCAGGAGUGAGGAGUGU   1   ||--|||||||||||||||||||||| targets:39   ACAACUCUCAGUCCUCACUCCUCACA   64 Target Full Sequence	0.0	PREDICTED: Glycine max H/ACA ribonucleoprotein complex subunit 2-like protein (LOC100807916), mRNA	H/ACA ribonucleoprotein complex subunit 2-like protein(LOC100807916)	coding protein	psRNATarget
XM_014773165.1	ncRNA:24   UGGAGAGUCAGGAGUGAGGAGUGU   1   =*|||||||||||||||||||||| targets:167   GGCUCUCAGUCCUCACUCCUCACA   190 Target Full Sequence	0.0	PREDICTED: Glycine max zinc finger BED domain-containing protein DAYSLEEPER-like (LOC106797883), mRNA	zinc finger BED domain-containing protein DAYSLEEPER-like(LOC106797883)	coding protein	psRNATarget
XM_014772286.1	ncRNA:24   UGGAGAGUCAGGAGUGAGGAGUGU   1   |=||-|||*||||||||||||||* targets:178   AUCU-UCACUCCUCACUCCUCACU   200 Target Full Sequence	2.0	PREDICTED: Glycine max probable leucine-rich repeat receptor-like protein kinase At1g68400 (LOC100783323), mRNA	probable leucine-rich repeat receptor-like protein kinase At1g68400(LOC100783323)	coding protein	psRNATarget