ncRNA ID | novel_gma_miR2724 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:1756624-1756812 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451661 |
Length | 21 |
Mature sequence(if miRNA) | 1 - GUAUAAAGGAUAAUGAGACAU - 21 |
Stem-loop(if miRNA) |
--A     C                    UUA               C    -      -         ----A     GUC   A  U     AUAU    UCUCA UAUCUUUUAUACUCAUCUCA   UUUUUUAAAAUUUAA UUUC CUUUUU CUCACAAUU     AUUUG   UAU CU AGUAU    U    ||||| ||||||||||||||||||||   ||||||||||||||| |||| |||||| |||||||||     |||||   ||| || |||||    C    AGAGU AUAGGAAAUAUGAGUGGAGU   AAAAAAUUUUAAAUU AAAG GAAAAA GAGUGUUAA     UAAAU   AUA GA UCAUA    A UAC     A                    -UA               A    A      A         AAAAA     -AA   C  U     ACUG |
Stem-loop sequence | AUCUCACUAUCUUUUAUACUCAUCUCAUUAUUUUUUAAAAUUUAACUUUCCUUUUUCUCACAAUUAAUUUGGUCUAUACUUAGUAUAUAUUCAGUCAAUACUUAGCAUAAAUAAAUAAAAAAAUUGUGAGAAAAAAGAGAAAAUUAAAUUUUAAAAAAAUUGAGGUGAGUAUAAAGGAUAAUGAGACAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003532057.3 |
|
3.0 | PREDICTED: Glycine max HVA22-like protein f (LOC100819566), mRNA | HVA22-like protein f(LOC100819566) | coding protein | psRNATarget |