ncRNA ID | novel_gma_miR2720 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:7205437-7205548 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451661 |
Length | 20 |
Mature sequence(if miRNA) | 1 - AGUUUUGAUUGGAGAAAAGU - 20 |
Stem-loop(if miRNA) |
--UA    G                    C         A  UGGAAUAAAG     - AU     UUCU CAAUCAAAAUUGGAGUUUCA UUCAGUAAC CG          GUUGA C  U     |||| |||||||||||||||||||| ||||||||| ||          ||||| |     AAGA GUUAGUUUUGAUCUCAAAGU GAGUCAUUG GU          CGACU G  U UGAA    G                    A         -  --------UA     A AA |
Stem-loop sequence | UAUUCUGCAAUCAAAAUUGGAGUUUCACUUCAGUAACACGUGGAAUAAAGGUUGACAUUUAAGAUCAGCAUUGGUUACUGAGAUGAAACUCUAGUUUUGAUUGGAGAAAAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003518523.3 |
|
2.5 | PREDICTED: Glycine max WRKY transcription factor 1-like (LOC100782726), mRNA | WRKY transcription factor 1-like(LOC100782726) | coding protein | psRNATarget | |||||||||
XM_006573142.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100777527 (LOC100777527), transcript variant X2, mRNA | uncharacterized LOC100777527(LOC100777527) | coding protein | psRNATarget | |||||||||
XM_006573141.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100777527 (LOC100777527), transcript variant X1, mRNA | uncharacterized LOC100777527(LOC100777527) | coding protein | psRNATarget |