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BaseInfo

ncRNA ID novel_gma_miR2714
Species Glycine max
Class miRNA
Genome position Chr18:40606491-40606617 [+]
Reference genome Glycine_max_v2.0
Source SRR1451661
Length 24
Mature sequence(if miRNA) 1 - AACCACUUGGACUGGGCUCACCCA - 24
Stem-loop(if miRNA) --      -U   ACUG      -   ------A    C   -UA    U    U  A   UU   -    G
  AACCAC  UGG    GGCUCA CCC       CUGG UGU   GAGA GGGG AG UGA  CCA GCUU U
  ||||||  |||    |||||| |||       |||| |||   |||| |||| || |||  ||| ||||
  UUGGUG  GCC    CUGAGU GGG       GAUC ACA   CUUU UCCU UC ACU  GGU CGAG A
CG      UC   ---G      U   GCAGUAA    U   CCA    U    -  -   --   U    A
Stem-loop sequence AACCACUUGGACUGGGCUCACCCACUGGCUGUUAGAGAUGGGGUAGAUGAUUCCAGCUUGUAAGAGCUUGGUCACUUCCUUUUUCACCACAUCUAGAAUGACGGGGUUGAGUCGCCGCUGUGGUUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014766206.1
ncRNA:24   ACCCACUCGGGUCAGGUUCACCAA   1
  |||||*|||||||||||=||||||
targets:2881   UGGGUAAGCCCAGUCCAGGUGGUU   2904

2.5 PREDICTED: Glycine max uncharacterized LOC106795614 (LOC106795614), mRNA uncharacterized LOC106795614(LOC106795614) coding protein psRNATarget