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BaseInfo

ncRNA ID novel_gma_miR2697
Species Glycine max
Class miRNA
Genome position Chr15:24259839-24259909 [+]
Reference genome Glycine_max_v2.0
Source SRR1451661
Length 19
Mature sequence(if miRNA) 1 - CUCAACUUGAUCCGUAAAG - 19
Stem-loop(if miRNA) --C              AA   -GU    AUG  U  A
   UCAACUUGAUCCGU  AGU   UUUG   GA GC G
   ||||||||||||||  |||   ||||   || ||
   AGUUGAACUAGGCA  UCA   AGGC   UU CG A
CCU              -C   ACU    --A  -  A
Stem-loop sequence CUCAACUUGAUCCGUAAAGUGUUUUGAUGGAUGCAGAAGCUUACGGAUCAACUCACGGAUCAAGUUGAUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014768353.1
ncRNA:19   GAAAUGCCUAGUUCAACUC   1
  |||||||||||||*||||*
targets:509   CUUUACGGAUCAACUUGAU   527

2.5 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_003547498.3
ncRNA:19   GAAAUGCCUAGUUCAACUC   1
  *|||=|||||||||||||*
targets:210   GUUUGCGGAUCAAGUUGAC   228

3.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_014768353.1
ncRNA:19   GAAAUGCCUAGUUCAACUC   1
  *|||=|||||||||||||*
targets:805   GUUUGCGGAUCAAGUUGAC   823

3.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_014768353.1
ncRNA:19   GAAAUGCCUAGUUCAACUC   1
  **||||||||||||||||*
targets:592   AAUUACGGAUCAAGUUGAU   610

3.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget