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BaseInfo

ncRNA ID novel_gma_miR2689
Species Glycine max
Class miRNA
Genome position Chr1:2516288-2516432 [+]
Reference genome Glycine_max_v2.0
Source SRR1451661
Length 24
Mature sequence(if miRNA) 122 - CUUCCGGUAGAACAAUUUAUUCUU - 145
Stem-loop(if miRNA) --      UUUG                              ------CUUUC GGAAGAAGGUUCUUCCGGAAGA
  GAAUAA    UGUUCUACCGGAAGAACCUUUUUCCGGAAG           C                      A
  ||||||    ||||||||||||||||||||||||||||||           |                      C
  CUUAUU    ACAAGAUGGCCUUCUUGGAAGAAGGCCUUC           C                      A
UU      --UA                              UUGUUGUUAAA AAGAAGGCCUUCUUGUUGUUAA
Stem-loop sequence GAAUAAUUUGUGUUCUACCGGAAGAACCUUUUUCCGGAAGCUUUCCGGAAGAAGGUUCUUCCGGAAGAACAAAUUGUUGUUCUUCCGGAAGAACAAAUUGUUGUUCUUCCGGAAGAAGGUUCUUCCGGUAGAACAAUUUAUUCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003519814.3
ncRNA:24   UUCUUAUUUAACAAGAUGGCCUUC   1
  =**=*||||*||||||||||||||
targets:553   GCCGUUAAAGUGUUCUACCGGAAG   576

1.0 PREDICTED: Glycine max oligopeptide transporter 7-like (LOC100777917), mRNA oligopeptide transporter 7-like(LOC100777917) coding protein psRNATarget