ncRNA ID | novel_gma_miR2679 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:28656065-28656225 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451661;SRR1451620 |
Length | 22 |
Mature sequence(if miRNA) | 140 - AAACGAUGUAGAAUGUCCACAU - 161 |
Stem-loop(if miRNA) |
--AAA                  -------                                G   A          GUUCUAA      CGAUGUAGAAUGUCCACA       UUGGUUUUGGAGGUACAAACGAUGUAGAAUGU GAU UUCUACAUCG       A      ||||||||||||||||||       |||||||||||||||||||||||||||||||| ||| ||||||||||      GCUACAUCUUACAGGUGU       AGCUAAGACUUCCAUGUUUGUUACAUCUUACA UUG AAGAUGUAGC       G UGUUA                  AAGAUGU                                G   A          AAACAUA |
Stem-loop sequence | AAACGAUGUAGAAUGUCCACAUUGGUUUUGGAGGUACAAACGAUGUAGAAUGUGGAUAUUCUACAUCGGUUCUAAAGAUACAAACGAUGUAGAAAGUUGACAUUCUACAUUGUUUGUACCUUCAGAAUCGAUGUAGAAUGUGGACAUUCUACAUCGAUUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006576010.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102668576 (LOC102668576), mRNA | uncharacterized LOC102668576(LOC102668576) | coding protein | psRNATarget |