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BaseInfo

ncRNA ID novel_gma_miR2679
Species Glycine max
Class miRNA
Genome position Chr1:28656065-28656225 [-]
Reference genome Glycine_max_v2.0
Source SRR1451661;SRR1451620
Length 22
Mature sequence(if miRNA) 140 - AAACGAUGUAGAAUGUCCACAU - 161
Stem-loop(if miRNA) --AAA                  -------                                G   A          GUUCUAA
     CGAUGUAGAAUGUCCACA       UUGGUUUUGGAGGUACAAACGAUGUAGAAUGU GAU UUCUACAUCG       A
     ||||||||||||||||||       |||||||||||||||||||||||||||||||| ||| ||||||||||
     GCUACAUCUUACAGGUGU       AGCUAAGACUUCCAUGUUUGUUACAUCUUACA UUG AAGAUGUAGC       G
UGUUA                  AAGAUGU                                G   A          AAACAUA
Stem-loop sequence AAACGAUGUAGAAUGUCCACAUUGGUUUUGGAGGUACAAACGAUGUAGAAUGUGGAUAUUCUACAUCGGUUCUAAAGAUACAAACGAUGUAGAAAGUUGACAUUCUACAUUGUUUGUACCUUCAGAAUCGAUGUAGAAUGUGGACAUUCUACAUCGAUUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006576010.2
ncRNA:22   UACACCUGUAAGAUGUAGCAAA   1
  ****|||||||||||*||||||
targets:295   CAAGGGACAUUCUACUUCGUUU   316

2.5 PREDICTED: Glycine max uncharacterized LOC102668576 (LOC102668576), mRNA uncharacterized LOC102668576(LOC102668576) coding protein psRNATarget