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BaseInfo

ncRNA ID	novel_gma_miR2672
Species	Glycine max
Class	miRNA
Genome position	Chr7:17373862-17373974 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451660
Length	21
Mature sequence(if miRNA)	1 - UUUCUGUUUUUAUUUUCUGAA - 21
Stem-loop(if miRNA)	--    --           UC      --------A    -  CAUUUUUAAAAUAUUAGAA   UUUC  UGUUUUUAUUU  UGAAAA         UAUU UU                   U   ||||  |||||||||||  ||||||         |||| ||   AAAG  ACAAAAAUAAA  ACUUUU         UCUU AG                   U UA    UC           GA      GUCUUUUGU    C  UUUUGUUUGUACAAAAAUC
Stem-loop sequence	UUUCUGUUUUUAUUUUCUGAAAAAUAUUUUCAUUUUUAAAAUAUUAGAAUUCUAAAAACAUGUUUGUUUUGACUUCUUGUUUUCUGUUUUCAAGAAAUAAAAACACUGAAAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006580262.2	ncRNA:21   AAGUCUUUUAUUUUUGUCUUU   1   *|||||||*|||||||||||| targets:10   GUCAGAAAUUAAAAACAGAAA   30 Target Full Sequence	1.5	PREDICTED: Glycine max carbamoyl-phosphate synthase small chain, chloroplastic-like (LOC100776931), transcript variant X2, mRNA	carbamoyl-phosphate synthase small chain, chloroplastic-like(LOC100776931)	coding protein	psRNATarget
XM_003525056.3	ncRNA:21   AAGUCUUUUAUUUUUGUCUUU   1   *|||||||*|||||||||||| targets:7   GUCAGAAAUUAAAAACAGAAA   27 Target Full Sequence	1.5	PREDICTED: Glycine max carbamoyl-phosphate synthase small chain, chloroplastic-like (LOC100776931), transcript variant X1, mRNA	carbamoyl-phosphate synthase small chain, chloroplastic-like(LOC100776931)	coding protein	psRNATarget
XM_006575153.2	ncRNA:21   AAGUCUUUUAUUUUUGUCUUU   1   ||||||=||||||||*||||| targets:2972   UUCAGAGAAUAAAAAAAGAAA   2992 Target Full Sequence	2.5	PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial (LOC100797551), transcript variant X2, mRNA	putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial(LOC100797551)	coding protein	psRNATarget
XM_003518014.3	ncRNA:21   AAGUCUUUUAUUUUUGUCUUU   1   ||||||=||||||||*||||| targets:3076   UUCAGAGAAUAAAAAAAGAAA   3096 Target Full Sequence	2.5	PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial (LOC100797551), transcript variant X1, mRNA	putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial(LOC100797551)	coding protein	psRNATarget
XM_006595558.2	ncRNA:21   AAGUCUUUUAUUUUUGUCUUU   1   ||||||*||||||||*||||| targets:5   UUCAGAUAAUAAAAAGAGAAA   25 Target Full Sequence	2.5	PREDICTED: Glycine max pyruvate dehydrogenase E1 component subunit beta, mitochondrial-like (LOC100817577), transcript variant X1, mRNA	pyruvate dehydrogenase E1 component subunit beta, mitochondrial-like(LOC100817577)	coding protein	psRNATarget
XM_014772609.1	ncRNA:21   AAGUCUU-UUAUUUUUGUCUUU   1   **|||=|-|||||||||||||| targets:3588   AACAGGAGAAUAAAAACAGAAA   3609 Target Full Sequence	3.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g32415, mitochondrial-like (LOC102669560), transcript variant X16, mRNA	pentatricopeptide repeat-containing protein At1g32415, mitochondrial-like(LOC102669560)	coding protein	psRNATarget
XM_014772605.1	ncRNA:21   AAGUCUU-UUAUUUUUGUCUUU   1   **|||=|-|||||||||||||| targets:3588   AACAGGAGAAUAAAAACAGAAA   3609 Target Full Sequence	3.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g32415, mitochondrial-like (LOC102669560), transcript variant X12, mRNA	pentatricopeptide repeat-containing protein At1g32415, mitochondrial-like(LOC102669560)	coding protein	psRNATarget
XM_014772594.1	ncRNA:21   AAGUCUU-UUAUUUUUGUCUUU   1   **|||=|-|||||||||||||| targets:3588   AACAGGAGAAUAAAAACAGAAA   3609 Target Full Sequence	3.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g32415, mitochondrial-like (LOC102669560), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At1g32415, mitochondrial-like(LOC102669560)	coding protein	psRNATarget
XM_014772598.1	ncRNA:21   AAGUCUU-UUAUUUUUGUCUUU   1   **|||=|-|||||||||||||| targets:3591   AACAGGAGAAUAAAAACAGAAA   3612 Target Full Sequence	3.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g32415, mitochondrial-like (LOC102669560), transcript variant X5, mRNA	pentatricopeptide repeat-containing protein At1g32415, mitochondrial-like(LOC102669560)	coding protein	psRNATarget
XM_014772596.1	ncRNA:21   AAGUCUU-UUAUUUUUGUCUUU   1   **|||=|-|||||||||||||| targets:3611   AACAGGAGAAUAAAAACAGAAA   3632 Target Full Sequence	3.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g32415, mitochondrial-like (LOC102669560), transcript variant X3, mRNA	pentatricopeptide repeat-containing protein At1g32415, mitochondrial-like(LOC102669560)	coding protein	psRNATarget
XM_014772607.1	ncRNA:21   AAGUCUU-UUAUUUUUGUCUUU   1   **|||=|-|||||||||||||| targets:3588   AACAGGAGAAUAAAAACAGAAA   3609 Target Full Sequence	3.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g32415, mitochondrial-like (LOC102669560), transcript variant X14, mRNA	pentatricopeptide repeat-containing protein At1g32415, mitochondrial-like(LOC102669560)	coding protein	psRNATarget
XM_014772602.1	ncRNA:21   AAGUCUU-UUAUUUUUGUCUUU   1   **|||=|-|||||||||||||| targets:3588   AACAGGAGAAUAAAAACAGAAA   3609 Target Full Sequence	3.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g32415, mitochondrial-like (LOC102669560), transcript variant X9, mRNA	pentatricopeptide repeat-containing protein At1g32415, mitochondrial-like(LOC102669560)	coding protein	psRNATarget
XM_014772599.1	ncRNA:21   AAGUCUU-UUAUUUUUGUCUUU   1   **|||=|-|||||||||||||| targets:3588   AACAGGAGAAUAAAAACAGAAA   3609 Target Full Sequence	3.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g32415, mitochondrial-like (LOC102669560), transcript variant X6, mRNA	pentatricopeptide repeat-containing protein At1g32415, mitochondrial-like(LOC102669560)	coding protein	psRNATarget
XM_014772603.1	ncRNA:21   AAGUCUU-UUAUUUUUGUCUUU   1   **|||=|-|||||||||||||| targets:3588   AACAGGAGAAUAAAAACAGAAA   3609 Target Full Sequence	3.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g32415, mitochondrial-like (LOC102669560), transcript variant X10, mRNA	pentatricopeptide repeat-containing protein At1g32415, mitochondrial-like(LOC102669560)	coding protein	psRNATarget
XM_014772597.1	ncRNA:21   AAGUCUU-UUAUUUUUGUCUUU   1   **|||=|-|||||||||||||| targets:3588   AACAGGAGAAUAAAAACAGAAA   3609 Target Full Sequence	3.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g32415, mitochondrial-like (LOC102669560), transcript variant X4, mRNA	pentatricopeptide repeat-containing protein At1g32415, mitochondrial-like(LOC102669560)	coding protein	psRNATarget