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BaseInfo

ncRNA ID novel_gma_miR2663
Species Glycine max
Class miRNA
Genome position Chr5:15717991-15718105 [-]
Reference genome Glycine_max_v2.0
Source SRR1451660
Length 23
Mature sequence(if miRNA) 1 - UGAUUGAAUGAUGAUAUAAAAUU - 23
Stem-loop(if miRNA) --UUUCAC                  AUA       AU    U   CAG   AG   
        AUUAUCAUUCAAUCACAA   AUCAUUG  AUGA UCU   GAU  UUAU
        ||||||||||||||||||   |||||||  |||| |||   |||  |||U
        UAGUAGUAAGUUAGUGUU   UGGUGAU  UAUU AGA   CUG  AAUA
UUAAAAUA                  AAG       AC    U   UAA   AA   
Stem-loop sequence UUUCACAUUAUCAUUCAAUCACAAAUAAUCAUUGAUAUGAUUCUCAGGAUAGUUAUUAUAAAAGUCAAUAGAUUUAUCAUAGUGGUGAAUUGUGAUUGAAUGAUGAUAUAAAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001252851.2
ncRNA:23   UUAAAAUAUAGUAGUAAGUUAGU   1
  =*|||||||*|||||||||*|||
targets:612   GUUUUUAUAACAUCAUUCAUUCA   634

2.5 Glycine max BTB/POZ domain-containing protein At3g05675-like (LOC100815389), mRNA BTB/POZ domain-containing protein At3g05675-like(LOC100815389) coding protein psRNATarget
BT093667.1
ncRNA:23   UUAAAAUAUAGUAGUAAGUUAGU   1
  =*|||||||*|||||||||*|||
targets:614   GUUUUUAUAACAUCAUUCAUUCA   636

2.5 Soybean clone JCVI-FLGm-17J15 unknown mRNA NA coding protein psRNATarget
XM_003527480.3
ncRNA:23   UUA-----AAAUAUAGUAGUAAGUUAGU   1
  |||-----||||||*|||||||||*|||
targets:727   AAUGGGUGUUUAUAACAUCAUUCAUUCA   754

2.5 PREDICTED: Glycine max BTB/POZ domain-containing protein At3g05675-like (LOC100812225), mRNA BTB/POZ domain-containing protein At3g05675-like(LOC100812225) coding protein psRNATarget