ncRNA ID | ahy-miR3514-5p |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | NA - AGGAUUCUGUAUUAACGGUGGA - NA |
Stem-loop(if miRNA) |
-------------ACAAUA                      G         -    CGU        -   UC    C       A         AAGUUUUU                    GAAGGAUUCUGUAUUAACGGUG ACAUGAUUU AUCU   UUUUAAAG AUA  UUUG AUUUCAU UGAGAUUUA        A                    |||||||||||||||||||||| ||||||||| ||||   |||||||| |||  |||| ||||||| |||||||||                    CUUCCUAAGACAUAAUUGCCAC UGUACUGAA UAGA   GAAAUUUU UAU  AAAU UAAAGUA ACUCUAAAU        U GGGGACUGAUUUAUAUUAA                      -         A    AUU        A   UU    U       C         AUAAUGGU |
Stem-loop sequence | ACAAUAGAAGGAUUCUGUAUUAACGGUGGACAUGAUUUAUCUCGUUUUUAAAGAUAUCUUUGCAUUUCAUAUGAGAUUUAAAGUUUUUAUUGGUAAUAUAAAUCUCACAUGAAAUUUAAAUUUAUAUUUUAAAGUUAAGAUAAAGUCAUGUCACCGUUAAUACAGAAUCCUUCAAUUAUAUUUAGUCAGGGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAER01017300.1 |
|
1.5 | TSA: Arachis hypogaea Unigene17308 mRNA sequence | NA | coding protein | psRNATarget |
1 | PMID:20047695
"Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)"; Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ; BMC Plant Biol. 10:3(2010). |