Search result

BaseInfo

ncRNA ID novel_gma_miR2653
Species Glycine max
Class miRNA
Genome position Chr2:31463120-31463324 [-]
Reference genome Glycine_max_v2.0
Source SRR1451660
Length 22
Mature sequence(if miRNA) 1 - CAUGGGUAUUGUAUAAUUCACU - 22
Stem-loop(if miRNA) --              A  -     -A UG  ---A       AAAA     AAU     --      AAGAGAA  UG A     CC  UU        A UG  AAA
  UGAAUUGUACAAUA CC UGACC  G  CU    UCUUGAG    GUGUA   GCGUA  GUGUUA       AG  U GGUUU  UA  UAGGAACC G  UU   G
  |||||||||||||| || |||||  |  ||    |||||||    |||||   |||||  ||||||       ||  | |||||  ||  |||||||| |  ||
  ACUUAAUAUGUUAU GG ACUGG  U  GA    AGAAUUU    UGCAU   UGUAU  CGCGAU       UU  G UCAAG  AU  AUCCUUGG U  GA   A
UC              G  U     AG GU  GCAC       ---G     -GU     AA      -GUUAAA  GU A     -A  UU        A GU  AAA
Stem-loop sequence UGAAUUGUACAAUAACCUGACCAGUGCUAUCUUGAGAAAAGUGUAAAUGCGUAGUGUUAAAGAGAAAGUGUAGGUUUCCUAUUUAGGAACCAGUGUUAAAGAAAAAGUGUAGGUUCCUAUUUAAGAACUAGUGUUAAAUUGUAGCGCAAUAUGUUGUACGUGUUUAAGACACGAGUGUGAGGUCAUGGGUAUUGUAUAAUUCACU