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BaseInfo

ncRNA ID novel_gma_miR2646
Species Glycine max
Class miRNA
Genome position Chr19:28075095-28075190 [+]
Reference genome Glycine_max_v2.0
Source SRR1451660
Length 24
Mature sequence(if miRNA) 73 - CAUGAAAUGGACAGCUCAUAAUGC - 96
Stem-loop(if miRNA) --                C                CACGUCUCUAAAA
  AUUAUGAGUUGUCCAU UCAUGUCAGUUUUGCA             A
  |||||||||||||||| ||||||||||||||||
  UAAUACUCGACAGGUA AGUACAGUCAAAACGU             U
CG                A                CCACUCUGUAAAU
Stem-loop sequence AUUAUGAGUUGUCCAUCUCAUGUCAGUUUUGCACACGUCUCUAAAAAUUAAAUGUCUCACCUGCAAAACUGACAUGAAAUGGACAGCUCAUAAUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003544475.3
ncRNA:24   CGUAAUACUCGACAGGUAAAGUAC   1
  |=||-|||||*||||*||||||||
targets:1641   GUAU-AUGAGAUGUCAAUUUCAUG   1663

2.5 PREDICTED: Glycine max uncharacterized LOC100814552 (LOC100814552), mRNA uncharacterized LOC100814552(LOC100814552) coding protein psRNATarget