ncRNA ID | novel_gma_miR2643 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:15417451-15417551 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294484 |
Length | 24 |
Mature sequence(if miRNA) | 78 - AACUUGAUCCGUAAACCUUUUAUG - 101 |
Stem-loop(if miRNA) |
--AAC           A               G            CGCUU      UUGAUCCGUAA CCUUUUAUGGAUCAA UUGAUUCGUAUG     A      ||||||||||| ||||||||||||||| ||||||||||||     A      AACUAGGCAUU GGAAAAUGCCUAGUU AACUAGGCAUAU     U AGUUC           C               G            AACUA |
Stem-loop sequence | AACUUGAUCCGUAAACCUUUUAUGGAUCAAGUUGAUUCGUAUGCGCUUAAUAUCAAUAUACGGAUCAAGUUGAUCCGUAAAAGGCUUACGGAUCAACUUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014768353.1 |
|
2.0 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget |