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BaseInfo

ncRNA ID novel_gma_miR2643
Species Glycine max
Class miRNA
Genome position Chr17:15417451-15417551 [-]
Reference genome Glycine_max_v2.0
Source SRR1294484
Length 24
Mature sequence(if miRNA) 78 - AACUUGAUCCGUAAACCUUUUAUG - 101
Stem-loop(if miRNA) --AAC           A               G            CGCUU
     UUGAUCCGUAA CCUUUUAUGGAUCAA UUGAUUCGUAUG     A
     ||||||||||| ||||||||||||||| ||||||||||||     A
     AACUAGGCAUU GGAAAAUGCCUAGUU AACUAGGCAUAU     U
AGUUC           C               G            AACUA
Stem-loop sequence AACUUGAUCCGUAAACCUUUUAUGGAUCAAGUUGAUUCGUAUGCGCUUAAUAUCAAUAUACGGAUCAAGUUGAUCCGUAAAAGGCUUACGGAUCAACUUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014768353.1
ncRNA:24   GUAUUUUCCAAAUGCCUAGUUCAA   1
  |=*|||||**||||||||||||||
targets:584   CGCAAAAGAAUUACGGAUCAAGUU   607

2.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget