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BaseInfo

ncRNA ID novel_gma_miR2633
Species Glycine max
Class miRNA
Genome position Chr18:20200362-20200495 [-]
Reference genome Glycine_max_v2.0
Source SRR1451660
Length 23
Mature sequence(if miRNA) 1 - UUUUAGAAAUUCUCCUUUUCAUG - 23
Stem-loop(if miRNA) --C       -     C      UUGC    AUUAA            AAGCA    UCAUACUUUAUAUAA
   GAAAAGG GAAUU CUGAAA    AUUU     UUAUCAUGAAGG     AUAG               A
   ||||||| ||||| ||||||    ||||     ||||||||||||     ||||               U
   CUUUUCC CUUAA GAUUUU    UAGA     AAUGGUACUUCC     AUUU               U
GUA       U     A      ---U    -----            --CUA    AGCUUUUCACCAUAA
Stem-loop sequence CGAAAAGGGAAUUCCUGAAAUUGCAUUUAUUAAUUAUCAUGAAGGAAGCAAUAGUCAUACUUUAUAUAAAUUAAUACCACUUUUCGAUUUAAUCCCUUCAUGGUAAAGAUUUUUUAGAAAUUCUCCUUUUCAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014777850.1
ncRNA:23   GUA---CUUUUCCUCUUAAAGAUUUU   1
  =||---||||||||*|||||||||||
targets:3017   UAUAAAGAAAAGGAUAAUUUCUAAAA   3042

1.5 PREDICTED: Glycine max uncharacterized LOC100816385 (LOC100816385), mRNA uncharacterized LOC100816385(LOC100816385) coding protein psRNATarget