ncRNA ID | novel_gma_miR2633 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:20200362-20200495 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451660 |
Length | 23 |
Mature sequence(if miRNA) | 1 - UUUUAGAAAUUCUCCUUUUCAUG - 23 |
Stem-loop(if miRNA) |
--C       -     C      UUGC    AUUAA            AAGCA    UCAUACUUUAUAUAA    GAAAAGG GAAUU CUGAAA    AUUU     UUAUCAUGAAGG     AUAG               A    ||||||| ||||| ||||||    ||||     ||||||||||||     ||||               U    CUUUUCC CUUAA GAUUUU    UAGA     AAUGGUACUUCC     AUUU               U GUA       U     A      ---U    -----            --CUA    AGCUUUUCACCAUAA |
Stem-loop sequence | CGAAAAGGGAAUUCCUGAAAUUGCAUUUAUUAAUUAUCAUGAAGGAAGCAAUAGUCAUACUUUAUAUAAAUUAAUACCACUUUUCGAUUUAAUCCCUUCAUGGUAAAGAUUUUUUAGAAAUUCUCCUUUUCAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014777850.1 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC100816385 (LOC100816385), mRNA | uncharacterized LOC100816385(LOC100816385) | coding protein | psRNATarget |