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BaseInfo

ncRNA ID novel_gma_miR2632
Species Glycine max
Class miRNA
Genome position Chr18:21472117-21472202 [-]
Reference genome Glycine_max_v2.0
Source SRR1451660
Length 22
Mature sequence(if miRNA) 65 - CAUUCUAAGACGGUUGUUAGCU - 86
Stem-loop(if miRNA) --CAUUC               C       AU          U
       UAAGACGGUUGUUAG UAACGAC  UCUUAGAAAG G
       ||||||||||||||| |||||||  ||||||||||
       AUUCUGUCAACAGUC AUUGUUG  AGAAUCUUUC U
CUGAAAA               A       GC          A
Stem-loop sequence CAUUCUAAGACGGUUGUUAGCUAACGACAUUCUUAGAAAGUGUACUUUCUAAGACGGUUGUUAACUGACAACUGUCUUAAAAAGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767461.1
ncRNA:22   UCGAUUGUUGGCAGAAUCUUAC   1
  ||-|||*|||||||||||||||
targets:2610   AG-UAAAAACCGUCUUAGAAUG   2630

1.0 PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA putative dual specificity protein phosphatase DSP8(LOC100787468) coding protein psRNATarget
XM_014773514.1
ncRNA:22   UCGAUUGUUGGCAGAAUCUUAC   1
  *|=||*=|||||||||||||||
targets:374   UGUUAUUAACCGUCUUAGAAUG   395

2.0 PREDICTED: Glycine max uncharacterized LOC106798042 (LOC106798042), transcript variant X1, mRNA uncharacterized LOC106798042(LOC106798042) coding protein psRNATarget
XM_014775607.1
ncRNA:22   UCGAUUGUUGGCAGAAUCUUAC   1
  |*||||=|||||||||*|||||
targets:1617   AACUAAUAACCGUCUUUGAAUG   1638

2.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014762037.1
ncRNA:22   UCGAU-UGUUGGCAGAAUCUUAC   1
  ***||-=||||||||||||||||
targets:970   UCAUAUGCAACCGUCUUAGAAUG   992

3.0 PREDICTED: Glycine max putative DUF21 domain-containing protein At1g03270 (LOC102659380), mRNA putative DUF21 domain-containing protein At1g03270(LOC102659380) coding protein psRNATarget
XM_014762037.1
ncRNA:22   UCGAUUGUUGGCAGAAUCUUAC   1
  *|=*||*=||||||||||||||
targets:884   UGUAAAGGACCGUCUUAGAAUG   905

3.0 PREDICTED: Glycine max putative DUF21 domain-containing protein At1g03270 (LOC102659380), mRNA putative DUF21 domain-containing protein At1g03270(LOC102659380) coding protein psRNATarget